RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 MBIPQ9NS73 344 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 DACT1Q9NYF0 836 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 SWAP70Q9UH65 585 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 ZNF510Q9Y2H8 683 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 C15orf41Q9Y2V0 281 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 TRPM3Q9HCF6 1732 aaPredicted RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 FAM221AA4D161 298 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 GOLGA6L4A6NEF3 574 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 FANCGO15287 622 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 KIF5CO60282 957 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 CEP104O60308 925 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 CUTAO60888 179 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 WDHD1O75717 1129 aaPredicted RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 PENKP01210 267 aaPredicted RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 VIL1P09327 827 aaKnown RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 HARSP12081 509 aaKnown RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 CYP11B2P19099 503 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 MAGEA10P43363 369 aaPredicted RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 MAP2K3P46734 347 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 PSMC1P62191 440 aaKnown RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 POSTNQ15063 836 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 E2F5Q15329 346 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 CAMK4Q16566 473 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 MYOCDQ8IZQ8 938 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 NME8Q8N427 588 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 TEX9Q8N6V9 391 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 SMYD1Q8NB12 490 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 P3H4Q92791 437 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 JAKMIP1Q96N16 626 aaKnown RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 SH3GL2Q99962 352 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 MOV10L1Q9BXT6 1211 aaKnown RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 SCAND2PQ9GZW5 306 aaPredicted RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 PIF1Q9H611 641 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 ZWILCHQ9H900 591 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 SH2B1Q9NRF2 756 aaPredicted RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 THRAP3Q9Y2W1 955 aaKnown RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 ELOA3CA0A087WX78 387 aaPredicted RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ELOA3DA6NLF2 546 aaPredicted RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 LRRIQ3A6PVS8 624 aaPredicted RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 NEURL1BA8MQ27 555 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 BUB1BO60566 1050 aaPredicted RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 SMIM24O75264 130 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 TRPC1P48995 793 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 GNG11P61952 73 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 GNGT1P63211 74 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 SKIDA1Q1XH10 827 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ELOA3BQ3SY89 546 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 PSAPL1Q6NUJ1 521 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 SULF2Q8IWU5 870 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ELOA3Q8NG57 546 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 TBC1D31Q96DN5 1066 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 PNKPQ96T60 521 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 MPHOSPH6Q99547 160 aaKnown RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 LRRCC1Q9C099 1032 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 MIR1-1HGQ9H1L0 117 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 OSBPL2Q9H1P3 480 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ADGRL3Q9HAR2 1447 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 SPATA31A6Q5VVP1 1343 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 TTC21AQ8NDW8 1320 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 VWA3AA6NCI4 1184 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 RASSF10A6NK89 507 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 M0R2C6 588 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ZNF189O75820 626 aaPredicted RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 LINGO3P0C6S8 592 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 SDSP20132 328 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 EPHA1P21709 976 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ARNTP27540 789 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ETFBP38117 255 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 INF2Q27J81 1249 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 KIAA0753Q2KHM9 967 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 LCA5Q86VQ0 697 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ELOA2Q8IYF1 753 aaPredicted RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 CEP57L1Q8IYX8 460 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 FBXO27Q8NI29 283 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 PICK1Q9NRD5 415 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ANO10Q9NW15 660 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 GGA1Q9UJY5 639 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 HPCAL4Q9UM19 191 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 BARX2Q9UMQ3 279 aaPredicted RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ALS2Q96Q42 1657 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 GOLGA8KD6RF30 607 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ARHGAP6O43182 974 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 NPTXRO95502 500 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ZFXP17010 805 aaPredicted RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 IBSPP21815 317 aaPredicted RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 HSPA4P34932 840 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 PSMD7P51665 324 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 XRCC4Q13426 336 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 RIPK1Q13546 671 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 SEPT6Q14141 434 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 LRRC14Q15048 493 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 TAF7Q15545 349 aaPredicted RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 C16orf87Q6PH81 154 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 ILDR2Q71H61 639 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 CACTIN-AS1Q8N1I8 211 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 SSH1Q8WYL5 1049 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 DHX58Q96C10 678 aa5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 SYTL4Q96C24 671 aaPredicted RBP5.69□□□□□ -1.5
TMEM39A-206ENST00000473684 PPP1R14BQ96C90 147 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms