RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 NDUFA10O95299 355 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 GNA14O95837 355 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 CTAGE8P0CG41 777 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 SNHG28P0DPA3 235 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 SRGNP10124 158 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 IDEP14735 1019 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 VEGFAP15692 232 aaPredicted RBP8.88□□□□□ -0.99
SMC4-212ENST00000470240 HDLBPQ00341 1268 aaKnown RBP8.88□□□□□ -0.99
SMC4-212ENST00000470240 DDR1Q08345 913 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 DMTNQ08495 405 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 AP3B2Q13367 1082 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 NNTQ13423 1086 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 FIGNQ5HY92 759 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 FOXR2Q6PJQ5 311 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 PODNQ7Z5L7 613 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 CTAGE6Q86UF2 777 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 TEX2Q8IWB9 1127 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 CTAGE4Q8IX94 777 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 CCDC65Q8IXS2 484 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 GUF1Q8N442 669 aaKnown RBP8.88□□□□□ -0.99
SMC4-212ENST00000470240 RPGRIP1Q96KN7 1286 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 DNAJC7Q99615 494 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 ARHGAP9Q9BRR9 750 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 DEF6Q9H4E7 631 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 PSTPIP2Q9H939 334 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 MRPL44Q9H9J2 332 aaKnown RBP8.88□□□□□ -0.99
SMC4-212ENST00000470240 KANSL2Q9H9L4 492 aa8.88□□□□□ -0.99
SMC4-212ENST00000470240 EPN1Q9Y6I3 576 aaPredicted RBP8.88□□□□□ -0.99
SMC4-212ENST00000470240 CCDC151A5D8V7 595 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 ADH1CP00326 375 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 EPS15P42566 896 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 SLC1A4P43007 532 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 RBM5P52756 815 aaKnown RBP eCLIP8.87□□□□□ -0.99
SMC4-212ENST00000470240 EIF6P56537 245 aaKnown RBP8.87□□□□□ -0.99
SMC4-212ENST00000470240 MTF1Q14872 753 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 MAN2A1Q16706 1144 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 SLC35G1Q2M3R5 365 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 MAP9Q49MG5 647 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 CCDC122Q5T0U0 273 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 MOXD1Q6UVY6 613 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 ZNF662Q6ZS27 426 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 ARHGAP27Q6ZUM4 889 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 ZNF771Q7L3S4 317 aaPredicted RBP8.87□□□□□ -0.99
SMC4-212ENST00000470240 SH3BP5LQ7L8J4 393 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 ZSCAN29Q8IWY8 852 aaPredicted RBP8.87□□□□□ -0.99
SMC4-212ENST00000470240 ADGRF4Q8IZF3 695 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 SUPT20HQ8NEM7 779 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 RAD54LQ92698 747 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 JAKMIP2Q96AA8 810 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 COA7Q96BR5 231 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 CCDC42Q96M95 316 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 ZDHHC15Q96MV8 337 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 MTMR9Q96QG7 549 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 ERGIC2Q96RQ1 377 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 SLF1Q9BQI6 1058 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 MRIQ9BWK5 157 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 NUCKS1Q9H1E3 243 aaKnown RBP8.87□□□□□ -0.99
SMC4-212ENST00000470240 QTRT2Q9H974 415 aaKnown RBP8.87□□□□□ -0.99
SMC4-212ENST00000470240 HMX1Q9NP08 348 aaPredicted RBP8.87□□□□□ -0.99
SMC4-212ENST00000470240 TMEM260Q9NX78 707 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 TMOD2Q9NZR1 351 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 NRXN2Q9P2S2 1712 aa8.87□□□□□ -0.99
SMC4-212ENST00000470240 ANKRD31Q8N7Z5 1873 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 TTC26A0AVF1 554 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 CAPN5O15484 640 aaPredicted RBP8.86□□□□□ -0.99
SMC4-212ENST00000470240 RAD21O60216 631 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 COBLO75128 1261 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 TRIM37O94972 964 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 FOSP01100 380 aaPredicted RBP8.86□□□□□ -0.99
SMC4-212ENST00000470240 KRT18P05783 430 aaKnown RBP8.86□□□□□ -0.99
SMC4-212ENST00000470240 CRKP46108 304 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 USP11P51784 963 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 ERVK-24P63145 666 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 CDK17Q00537 523 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 KIF5AQ12840 1032 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 IKQ13123 557 aaPredicted RBP8.86□□□□□ -0.99
SMC4-212ENST00000470240 GRB10Q13322 594 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 MCM6Q14566 821 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 CERKLQ49MI3 558 aaPredicted RBP8.86□□□□□ -0.99
SMC4-212ENST00000470240 CCDC40Q4G0X9 1142 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 VWA3BQ502W6 1294 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 ANKRD40Q6AI12 368 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 CENPPQ6IPU0 288 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 CDC42EP5Q6NZY7 148 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 TMEM179Q6ZVK1 233 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 RSRC2Q7L4I2 434 aaKnown RBP8.86□□□□□ -0.99
SMC4-212ENST00000470240 ZBTB33Q86T24 672 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 MYOCDQ8IZQ8 938 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 SLC35F6Q8N357 371 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 ACRBPQ8NEB7 543 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 NEK11Q8NG66 645 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 ZNF507Q8TCN5 953 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 CEP63Q96MT8 703 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 ALS2CR12Q96Q35 445 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 EDEM3Q9BZQ6 932 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 CPVLQ9H3G5 476 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 EHMT1Q9H9B1 1298 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 PRDM10Q9NQV6 1147 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 NYAP2Q9P242 653 aa8.86□□□□□ -0.99
SMC4-212ENST00000470240 PI4KBQ9UBF8 816 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms