RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 PPP2R2CQ9Y2T4 447 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 MYO1FO00160 1098 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 MED7O43513 233 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 LONRF3Q496Y0 759 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 GPIHBP1Q8IV16 184 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 KLHL7Q8IXQ5 586 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 AGBL3Q8NEM8 1001 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 ITSN1Q15811 1721 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 LRRC41Q15345 812 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 GTF3C2Q8WUA4 911 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-213ENST00000469300 EPSTI1Q96J88 318 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 SNX25Q9H3E2 840 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 ATP6V0A4Q9HBG4 840 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 FLT1P17948 1338 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 ZNF233A6NK53 670 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 ASB14A6NK59 587 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 CDC25AP30304 524 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 SLIT1O75093 1534 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 FCER1AP12319 257 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 DDIT3P35638 169 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 CCDC6Q16204 474 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 INTS5Q6P9B9 1019 aaKnown RBP16.39■□□□□ 0.21
LIMS2-213ENST00000469300 LRRC8AQ8IWT6 810 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 ADGRF4Q8IZF3 695 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 RSAD2Q8WXG1 361 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 TBC1D31Q96DN5 1066 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 RUNDC3BQ96NL0 473 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 APOL6Q9BWW8 343 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 SAMD15Q9P1V8 674 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 P4HBP07237 508 aaKnown RBP16.39■□□□□ 0.21
LIMS2-213ENST00000469300 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-213ENST00000469300 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 THAP12O43422 761 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 GBP1P32455 592 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 MXRA7P84157 204 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 KMT5BQ4FZB7 885 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 CFAP157Q5JU67 520 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 C10orf76Q5T2E6 689 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 PROM2Q8N271 834 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 OTUD5Q96G74 571 aa16.39■□□□□ 0.21
LIMS2-213ENST00000469300 TFAMQ00059 246 aaKnown RBP16.38■□□□□ 0.21
LIMS2-213ENST00000469300 MKRN3Q13064 507 aaKnown RBP16.38■□□□□ 0.21
LIMS2-213ENST00000469300 CTTNQ14247 550 aaKnown RBP16.38■□□□□ 0.21
LIMS2-213ENST00000469300 COG2Q14746 738 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 RPF1Q9H9Y2 349 aaKnown RBP16.38■□□□□ 0.21
LIMS2-213ENST00000469300 UBN2Q6ZU65 1347 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 ZBED6P86452 979 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 EXOSC10Q01780 885 aaKnown RBP16.38■□□□□ 0.21
LIMS2-213ENST00000469300 DNAJC21Q5F1R6 531 aaKnown RBP16.38■□□□□ 0.21
LIMS2-213ENST00000469300 SCYL2Q6P3W7 929 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 INTS8Q75QN2 995 aaKnown RBP16.38■□□□□ 0.21
LIMS2-213ENST00000469300 BBOF1Q8ND07 529 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 ODF2LQ9ULJ1 636 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 ATP8B3O60423 1300 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 REREQ9P2R6 1566 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 KCNK3O14649 394 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 NMT2O60551 498 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 UAP1Q16222 522 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-213ENST00000469300 SRGAP1Q7Z6B7 1085 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 P3H4Q92791 437 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 TNFAIP2Q03169 654 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 DMTNQ08495 405 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 SETDB1Q15047 1291 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 CEP63Q96MT8 703 aa16.38■□□□□ 0.21
LIMS2-213ENST00000469300 ZNF70Q9UC06 446 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-213ENST00000469300 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
LIMS2-213ENST00000469300 MAP3K14Q99558 947 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 TRIM31Q9BZY9 425 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 PLCB1Q9NQ66 1216 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 HACL1Q9UJ83 578 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 CASP14P31944 242 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 MAN1A1P33908 653 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 PPP4CP60510 307 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 SNAP25P60880 206 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
LIMS2-213ENST00000469300 LMNB2Q03252 620 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 RNASELQ05823 741 aaKnown RBP16.37■□□□□ 0.21
LIMS2-213ENST00000469300 C2orf40Q9H1Z8 148 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 MRPL47Q9HD33 250 aaKnown RBP16.37■□□□□ 0.21
LIMS2-213ENST00000469300 PHKA2P46019 1235 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 ZNF543Q08ER8 600 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 B4GALNT4Q76KP1 1039 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 CCDC170Q8IYT3 715 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 TOPORSQ9NS56 1045 aaPredicted RBP16.37■□□□□ 0.21
LIMS2-213ENST00000469300 NRBP1Q9UHY1 535 aa16.37■□□□□ 0.21
LIMS2-213ENST00000469300 GPR75-ASB3A0A0A6YYF3 556 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 EIF3CLB5ME19 914 aaKnown RBP16.36■□□□□ 0.21
LIMS2-213ENST00000469300 CLIC2O15247 247 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 MAPK6Q16659 721 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 CATSPER4Q7RTX7 472 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 AFAP1L2Q8N4X5 818 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 PSMB7Q99436 277 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 EIF3CQ99613 913 aaKnown RBP16.36■□□□□ 0.21
LIMS2-213ENST00000469300 RFX1P22670 979 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 SMARCA1P28370 1054 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 CDC27P30260 824 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 CDC42EP5Q6NZY7 148 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms