RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 NEK9Q8TD19 979 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 NOC3LQ8WTT2 800 aaKnown RBP13.55□□□□□ -0.24
LAMP3-202ENST00000466939 DNAJC19Q96DA6 116 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 CTAGE1Q96RT6 745 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 PAGR1Q9BTK6 254 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 KCNF1Q9H3M0 494 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 ZHX3Q9H4I2 956 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 A1CFQ9NQ94 594 aaKnown RBP13.55□□□□□ -0.24
LAMP3-202ENST00000466939 FBXO40Q9UH90 709 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 A0A0G2JMZ2 1700 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 KCNJ18B7U540 433 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 NR3C2P08235 984 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 OSBPP22059 807 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 RAD51AP2Q09MP3 1159 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 KCNJ12Q14500 433 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 FAM26FQ5R3K3 315 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 LDLRAD1Q5T700 205 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 RIOX2Q8IUF8 465 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 CREBRFQ8IUR6 639 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 ANKRD35Q8N283 1001 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 SYT2Q8N9I0 419 aaPredicted RBP13.55□□□□□ -0.24
LAMP3-202ENST00000466939 CCDC150Q8NCX0 1101 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 SLC10A4Q96EP9 437 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 HSD17B14Q9BPX1 270 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 ASCC2Q9H1I8 757 aaPredicted RBP13.55□□□□□ -0.24
LAMP3-202ENST00000466939 BHMT2Q9H2M3 363 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 TBC1D22BQ9NU19 505 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 BTBD7Q9P203 1132 aa13.55□□□□□ -0.24
LAMP3-202ENST00000466939 MAGEC2Q9UBF1 373 aaPredicted RBP13.55□□□□□ -0.24
LAMP3-202ENST00000466939 TBCAO75347 108 aaKnown RBP13.54□□□□□ -0.24
LAMP3-202ENST00000466939 MUTP22033 750 aa13.54□□□□□ -0.24
LAMP3-202ENST00000466939 PMS1P54277 932 aaKnown RBP13.54□□□□□ -0.24
LAMP3-202ENST00000466939 HERVK_113P62684 666 aa13.54□□□□□ -0.24
LAMP3-202ENST00000466939 ITGB3BPQ13352 177 aaPredicted RBP13.54□□□□□ -0.24
LAMP3-202ENST00000466939 SNAPC2Q13487 334 aa13.54□□□□□ -0.24
LAMP3-202ENST00000466939 TTI2Q6NXR4 508 aa13.54□□□□□ -0.24
LAMP3-202ENST00000466939 NCAPG2Q86XI2 1143 aa13.54□□□□□ -0.24
LAMP3-202ENST00000466939 CACTINQ8WUQ7 758 aaKnown RBP13.54□□□□□ -0.24
LAMP3-202ENST00000466939 NACC1Q96RE7 527 aa13.54□□□□□ -0.24
LAMP3-202ENST00000466939 LXNQ9BS40 222 aa13.54□□□□□ -0.24
LAMP3-202ENST00000466939 SPATC1LQ9H0A9 340 aa13.54□□□□□ -0.24
LAMP3-202ENST00000466939 THAP9Q9H5L6 903 aa13.54□□□□□ -0.24
LAMP3-202ENST00000466939 INTS13Q9NVM9 706 aa13.54□□□□□ -0.24
LAMP3-202ENST00000466939 SAMM50Q9Y512 469 aa13.54□□□□□ -0.24
LAMP3-202ENST00000466939 PFASO15067 1338 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 A0A1B0GTH6 734 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 PEX10O60683 326 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 SLITRK3O94933 977 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 EHHADHQ08426 723 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 LRMPQ12912 555 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 KRT31Q15323 416 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 ARSHQ5FYA8 562 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 HERC4Q5GLZ8 1057 aaPredicted RBP13.53□□□□□ -0.24
LAMP3-202ENST00000466939 B3GNT9Q6UX72 402 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 VSIG10LQ86VR7 867 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 FAM114A1Q8IWE2 563 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 MYOCDQ8IZQ8 938 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 GUF1Q8N442 669 aaKnown RBP13.53□□□□□ -0.24
LAMP3-202ENST00000466939 CSGALNACT2Q8N6G5 542 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 BANK1Q8NDB2 785 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 PIGOQ8TEQ8 1089 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 GPRASP2Q96D09 838 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 TSG101Q99816 390 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 SRRTQ9BXP5 876 aaKnown RBP13.53□□□□□ -0.24
LAMP3-202ENST00000466939 RRAGCQ9HB90 399 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 TAB2Q9NYJ8 693 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 TBC1D7Q9P0N9 293 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 LIMA1Q9UHB6 759 aaKnown RBP13.53□□□□□ -0.24
LAMP3-202ENST00000466939 PYCARDQ9ULZ3 195 aa13.53□□□□□ -0.24
LAMP3-202ENST00000466939 DHX15O43143 795 aaKnown RBP13.52□□□□□ -0.25
LAMP3-202ENST00000466939 NRDCO43847 1150 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 ZNF500O60304 480 aaPredicted RBP13.52□□□□□ -0.25
LAMP3-202ENST00000466939 KIF20AO95235 890 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 SFPQP23246 707 aaKnown RBP eCLIP13.52□□□□□ -0.25
LAMP3-202ENST00000466939 CLCN1P35523 988 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 COPB2P35606 906 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 GJA5P36382 358 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 JAK3P52333 1124 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 COPB1P53618 953 aaKnown RBP13.52□□□□□ -0.25
LAMP3-202ENST00000466939 KRT76Q01546 638 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 GIT2Q14161 759 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 ARID5BQ14865 1188 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 LRRC41Q15345 812 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 TCP11X2Q5H9J9 407 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 ANKRD40Q6AI12 368 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 LRRC8AQ8IWT6 810 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 DUSP9Q99956 384 aaKnown RBP13.52□□□□□ -0.25
LAMP3-202ENST00000466939 REEP2Q9BRK0 252 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 RUSC1Q9BVN2 902 aa13.52□□□□□ -0.25
LAMP3-202ENST00000466939 ARHGEF35A5YM69 484 aa13.51□□□□□ -0.25
LAMP3-202ENST00000466939 UNCXA6NJT0 531 aa13.51□□□□□ -0.25
LAMP3-202ENST00000466939 POTEB2H3BUK9 544 aa13.51□□□□□ -0.25
LAMP3-202ENST00000466939 N4BP3O15049 544 aa13.51□□□□□ -0.25
LAMP3-202ENST00000466939 CNMDO75829 334 aa13.51□□□□□ -0.25
LAMP3-202ENST00000466939 STAM2O75886 525 aa13.51□□□□□ -0.25
LAMP3-202ENST00000466939 SLC25A27O95847 323 aa13.51□□□□□ -0.25
LAMP3-202ENST00000466939 P4HBP07237 508 aaKnown RBP13.51□□□□□ -0.25
LAMP3-202ENST00000466939 TPM2P07951 284 aa13.51□□□□□ -0.25
LAMP3-202ENST00000466939 EEF1GP26641 437 aaKnown RBP13.51□□□□□ -0.25
LAMP3-202ENST00000466939 MOGSQ13724 837 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms