RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 EFEMP2O95967 443 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 TRHRP34981 398 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 SMAD3P84022 425 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 TUSC3Q13454 348 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 LRRC32Q14392 662 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 TERF2Q15554 542 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 SMAD2Q15796 467 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 TIGD5Q53EQ6 642 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 SYDE2Q5VT97 1194 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 MILR1Q7Z6M3 343 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 RASSF3Q86WH2 238 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 KIAA1958Q8N8K9 716 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 TTLL11Q8NHH1 800 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 PCIF1Q9H4Z3 704 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 PCDHB4Q9Y5E5 795 aa5.92□□□□□ -1.46
CDC42BPA-211ENST00000466538 TCRBV5S2A0A599 114 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 F8W031 263 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 SCDO00767 359 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 DVL2O14641 736 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 TGM5O43548 720 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 HYAL3O43820 417 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 KRT37O76014 449 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 PRKD3O94806 890 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 SLC9A1P19634 815 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 SDHAP31040 664 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 FNTBP49356 437 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 KIF11P52732 1056 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 TTF1Q15361 905 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 DDB1Q16531 1140 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 ZMYM1Q5SVZ6 1142 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 BROXQ5VW32 411 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 BTBD8Q5XKL5 378 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 ATG4DQ86TL0 474 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 NME9Q86XW9 330 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 SIRT2Q8IXJ6 389 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 ZNF610Q8N9Z0 462 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 JDP2Q8WYK2 163 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 AHCYL2Q96HN2 611 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 ELF4Q99607 663 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 TRIM8Q9BZR9 551 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 CD244Q9BZW8 370 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 H2AFY2Q9P0M6 372 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 TCEAL9Q9UHQ7 104 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 DBR1Q9UK59 544 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 PALD1Q9ULE6 856 aa5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 G3BP2Q9UN86 482 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-211ENST00000466538 ABLIM1O14639 778 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 BUB1BO60566 1050 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 FBXO21O94952 628 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 PARNO95453 639 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 PTPN1P18031 435 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 MAPKAPK2P49137 400 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 NEK2P51955 445 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 HERVK_113P62684 666 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 ADCY1Q08828 1119 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 CCDC181Q5TID7 509 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 HDGFL2Q7Z4V5 671 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 CLRN3Q8NCR9 226 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 CLEC4DQ8WXI8 215 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 MTMR8Q96EF0 704 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 TSPAN17Q96FV3 270 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 KIRREL1Q96J84 757 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 SLC6A17Q9H1V8 727 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 TOMM22Q9NS69 142 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 HSPBP1Q9NZL4 362 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 TRHDEQ9UKU6 1024 aa5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 THRAP3Q9Y2W1 955 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 NOC2LQ9Y3T9 749 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-211ENST00000466538 E2F8A0AVK6 867 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 ZC3H12DA2A288 527 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 FAM90A27PA6NNH2 459 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 KCNK3O14649 394 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 GABRDO14764 452 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 CD40P25942 277 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 EPHA7Q15375 998 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 CPZQ66K79 652 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 FRMD7Q6ZUT3 714 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 COG1Q8WTW3 980 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 CHMP4CQ96CF2 233 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 INTS4Q96HW7 963 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 ZDHHC5Q9C0B5 715 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 RNF32Q9H0A6 362 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 CCDC8Q9H0W5 538 aaPredicted RBP5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 RIC8BQ9NVN3 520 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 USP36Q9P275 1121 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 CHPF2Q9P2E5 772 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 EID1Q9Y6B2 187 aa5.89□□□□□ -1.47
CDC42BPA-211ENST00000466538 OR14I1A6ND48 311 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 HRKO00198 91 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 BIN1O00499 593 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 C4BPAP04003 597 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 FAHP16930 419 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 GP2P55259 537 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 ERVK-21P61565 698 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 YBX1P67809 324 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 MCL1Q07820 350 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 KLF1Q13351 362 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 TMEM132BQ14DG7 1078 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms