RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 TPD52L1Q16890 204 aaPredicted RBP11.24□□□□□ -0.61
PMF1-204ENST00000466489 CEP55Q53EZ4 464 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 TAPT1Q6NXT6 567 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 DIS3L2Q8IYB7 885 aaKnown RBP11.24□□□□□ -0.61
PMF1-204ENST00000466489 FBXO18Q8NFZ0 1043 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 OR6J1Q8NGC5 347 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 IL31RAQ8NI17 732 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 RASGRP4Q8TDF6 673 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 PGBD1Q96JS3 809 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 INPP4AQ96PE3 977 aaPredicted RBP11.24□□□□□ -0.61
PMF1-204ENST00000466489 TUBB2BQ9BVA1 445 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 CRISPLD2Q9H0B8 497 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 TMEM260Q9NX78 707 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 OGDHLQ9ULD0 1010 aa11.24□□□□□ -0.61
PMF1-204ENST00000466489 MORC2Q9Y6X9 1032 aaPredicted RBP11.24□□□□□ -0.61
PMF1-204ENST00000466489 DNM1LO00429 736 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 FARP2O94887 1054 aaPredicted RBP11.23□□□□□ -0.61
PMF1-204ENST00000466489 CYP3A4P08684 503 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
PMF1-204ENST00000466489 GCFC2P16383 781 aaKnown RBP11.23□□□□□ -0.61
PMF1-204ENST00000466489 ICAM3P32942 547 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 MRPS9P82933 396 aaKnown RBP11.23□□□□□ -0.61
PMF1-204ENST00000466489 LAMC2Q13753 1193 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 STK38Q15208 465 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 GNASQ5JWF2 1037 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 LHX8Q68G74 356 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 NIPA1Q7RTP0 329 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 DHX37Q8IY37 1157 aaKnown RBP11.23□□□□□ -0.61
PMF1-204ENST00000466489 TBCKQ8TEA7 893 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 SENP7Q9BQF6 1050 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 MXRA8Q9BRK3 442 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 TSEN34Q9BSV6 310 aaKnown RBP11.23□□□□□ -0.61
PMF1-204ENST00000466489 FOXP1Q9H334 677 aaPredicted RBP11.23□□□□□ -0.61
PMF1-204ENST00000466489 TTC12Q9H892 705 aaPredicted RBP11.23□□□□□ -0.61
PMF1-204ENST00000466489 MLXIPQ9HAP2 919 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 JADE2Q9NQC1 790 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 PDGFCQ9NRA1 345 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 SYNRGQ9UMZ2 1314 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 CENPFP49454 3210 aa11.23□□□□□ -0.61
PMF1-204ENST00000466489 MOXD2PA6NHM9 499 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 NOP56O00567 594 aaKnown RBP11.22□□□□□ -0.61
PMF1-204ENST00000466489 DYNC1LI2O43237 492 aaPredicted RBP11.22□□□□□ -0.61
PMF1-204ENST00000466489 ZSCAN12O43309 604 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 KPNA6O60684 536 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 KIF20AO95235 890 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 PGK1P00558 417 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 TUBBP07437 444 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 SMPD1P17405 629 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 LIG1P18858 919 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 CST5P28325 142 aaPredicted RBP11.22□□□□□ -0.61
PMF1-204ENST00000466489 GJA9P57773 515 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 GUCY1B3Q02153 619 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 FSCN1Q16658 493 aaKnown RBP11.22□□□□□ -0.61
PMF1-204ENST00000466489 MOXD1Q6UVY6 613 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 PIK3AP1Q6ZUJ8 805 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 CCDC186Q7Z3E2 898 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 NECAB2Q7Z6G3 386 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 NEK8Q86SG6 692 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 FERMT3Q86UX7 667 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 UPF3AQ9H1J1 476 aaKnown RBP11.22□□□□□ -0.61
PMF1-204ENST00000466489 DOCK5Q9H7D0 1870 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.22□□□□□ -0.61
PMF1-204ENST00000466489 OGFRQ9NZT2 677 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 TFIP11Q9UBB9 837 aaKnown RBP11.22□□□□□ -0.61
PMF1-204ENST00000466489 DDX41Q9UJV9 622 aaKnown RBP11.22□□□□□ -0.61
PMF1-204ENST00000466489 GNEQ9Y223 722 aaKnown RBP11.22□□□□□ -0.61
PMF1-204ENST00000466489 UBIAD1Q9Y5Z9 338 aa11.22□□□□□ -0.61
PMF1-204ENST00000466489 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.21□□□□□ -0.61
PMF1-204ENST00000466489 POTEFA5A3E0 1075 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 BTBD18B2RXH4 712 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 SPATA31C2B4DYI2 1134 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 SPTLC2O15270 562 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 MARCH6O60337 910 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 DTNBO60941 627 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 NR1I2O75469 434 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 CABYRO75952 493 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 GGPS1O95749 300 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 TNNT1P13805 278 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 EN2P19622 333 aaPredicted RBP11.21□□□□□ -0.61
PMF1-204ENST00000466489 UBA1P22314 1058 aaKnown RBP11.21□□□□□ -0.61
PMF1-204ENST00000466489 LRRC41Q15345 812 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 CAMK4Q16566 473 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 INF2Q27J81 1249 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 LETM2Q2VYF4 491 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 PRR16Q569H4 304 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 CEP135Q66GS9 1140 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 CCDC62Q6P9F0 684 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 METTL7BQ6UX53 244 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 LRRC8AQ8IWT6 810 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 TRIML1Q8N9V2 468 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 EMID1Q96A84 441 aaPredicted RBP11.21□□□□□ -0.61
PMF1-204ENST00000466489 VTI1AQ96AJ9 217 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 LENG1Q96BZ8 264 aaPredicted RBP11.21□□□□□ -0.61
PMF1-204ENST00000466489 GLT1D1Q96MS3 346 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 HTATIP2Q9BUP3 242 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 KCNH7Q9NS40 1196 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 GJB4Q9NTQ9 266 aa11.21□□□□□ -0.61
PMF1-204ENST00000466489 ARGLU1Q9NWB6 273 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms