RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 SETD4Q9NVD3 440 aa17.69■□□□□ 0.42
NCSTN-210ENST00000465223 CACNA1GO43497 2377 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 NCOR2Q9Y618 2525 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 EPG5Q9HCE0 2579 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 H3BRB1 525 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 EIF3JO75822 258 aaKnown RBP17.68■□□□□ 0.42
NCSTN-210ENST00000465223 GGPS1O95749 300 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 CHRNA1P02708 482 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 PDHBP11177 359 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 CELF3Q5SZQ8 465 aaKnown RBP17.68■□□□□ 0.42
NCSTN-210ENST00000465223 ARHGEF16Q5VV41 709 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 SIRT2Q8IXJ6 389 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 MICAL1Q8TDZ2 1067 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 CPVLQ9H3G5 476 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 MFSD1Q9H3U5 465 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 TUT1Q9H6E5 874 aaKnown RBP17.68■□□□□ 0.42
NCSTN-210ENST00000465223 DNAH14Q0VDD8 3507 aa17.68■□□□□ 0.42
NCSTN-210ENST00000465223 NR3C2P08235 984 aa17.67■□□□□ 0.42
NCSTN-210ENST00000465223 SP2Q02086 613 aa17.67■□□□□ 0.42
NCSTN-210ENST00000465223 DUSP6Q16828 381 aa17.67■□□□□ 0.42
NCSTN-210ENST00000465223 CWF19L1Q69YN2 538 aaKnown RBP17.67■□□□□ 0.42
NCSTN-210ENST00000465223 CMTR2Q8IYT2 770 aaKnown RBP17.67■□□□□ 0.42
NCSTN-210ENST00000465223 C2CD4DB7Z1M9 353 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 PI15O43692 258 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 LGALS2P05162 132 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 TOP1P11387 765 aaKnown RBP17.66■□□□□ 0.42
NCSTN-210ENST00000465223 TECP42680 631 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 CLCN5P51795 746 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 ZNF543Q08ER8 600 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 LPIN1Q14693 890 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 ANGPT1Q15389 498 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 ANKRD54Q6NXT1 300 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 SYCE2Q6PIF2 218 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 FLCNQ8NFG4 579 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 LINC01599Q8WXQ3 324 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 BCAS3Q9H6U6 928 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 EHMT1Q9H9B1 1298 aa17.66■□□□□ 0.42
NCSTN-210ENST00000465223 EP300Q09472 2414 aaPredicted RBP17.66■□□□□ 0.42
NCSTN-210ENST00000465223 ZNF292O60281 2723 aa17.65■□□□□ 0.42
NCSTN-210ENST00000465223 SMARCA5O60264 1052 aaPredicted RBP17.65■□□□□ 0.42
NCSTN-210ENST00000465223 ASGR2P07307 311 aa17.65■□□□□ 0.42
NCSTN-210ENST00000465223 ATXN8OSP0DMR3 200 aa17.65■□□□□ 0.42
NCSTN-210ENST00000465223 GATMP50440 423 aa17.65■□□□□ 0.42
NCSTN-210ENST00000465223 ERVFC1P60507 584 aa17.65■□□□□ 0.42
NCSTN-210ENST00000465223 GPKOWQ92917 476 aaPredicted RBP eCLIP17.65■□□□□ 0.42
NCSTN-210ENST00000465223 ZFP91Q96JP5 570 aaPredicted RBP17.65■□□□□ 0.42
NCSTN-210ENST00000465223 UBA5Q9GZZ9 404 aa17.65■□□□□ 0.42
NCSTN-210ENST00000465223 PXMP2Q9NR77 195 aa17.65■□□□□ 0.42
NCSTN-210ENST00000465223 DOCK5Q9H7D0 1870 aa17.65■□□□□ 0.42
NCSTN-210ENST00000465223 TPRP12270 2363 aaKnown RBP17.64■□□□□ 0.41
NCSTN-210ENST00000465223 LMNAP02545 664 aaKnown RBP17.64■□□□□ 0.41
NCSTN-210ENST00000465223 GOLGA8HP0CJ92 632 aa17.64■□□□□ 0.41
NCSTN-210ENST00000465223 MYCLP12524 364 aaPredicted RBP17.64■□□□□ 0.41
NCSTN-210ENST00000465223 UBA1P22314 1058 aaKnown RBP17.64■□□□□ 0.41
NCSTN-210ENST00000465223 LLGL2Q6P1M3 1020 aa17.64■□□□□ 0.41
NCSTN-210ENST00000465223 PANK1Q8TE04 598 aa17.64■□□□□ 0.41
NCSTN-210ENST00000465223 DLL3Q9NYJ7 618 aa17.64■□□□□ 0.41
NCSTN-210ENST00000465223 NR2E1Q9Y466 385 aa17.64■□□□□ 0.41
NCSTN-210ENST00000465223 MYH6P13533 1939 aa17.64■□□□□ 0.41
NCSTN-210ENST00000465223 KAT6AQ92794 2004 aa17.64■□□□□ 0.41
NCSTN-210ENST00000465223 FOXP2O15409 715 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 ZFYP08048 801 aaPredicted RBP17.63■□□□□ 0.41
NCSTN-210ENST00000465223 ADAM17P78536 824 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 ARHGAP4P98171 946 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 MGAT3Q09327 533 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 KCNC3Q14003 757 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 TSHZ3Q63HK5 1081 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 RTN4RL1Q86UN2 441 aaPredicted RBP17.63■□□□□ 0.41
NCSTN-210ENST00000465223 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 CRIPAKQ8N1N5 446 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 CDCA3Q99618 268 aaPredicted RBP17.63■□□□□ 0.41
NCSTN-210ENST00000465223 POMKQ9H5K3 350 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 MLXIPQ9HAP2 919 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 ECHDC1Q9NTX5 307 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 ABCB11O95342 1321 aa17.63■□□□□ 0.41
NCSTN-210ENST00000465223 HMMRO75330 724 aa17.62■□□□□ 0.41
NCSTN-210ENST00000465223 GNAT1P11488 350 aa17.62■□□□□ 0.41
NCSTN-210ENST00000465223 CDC37Q16543 378 aaPredicted RBP17.62■□□□□ 0.41
NCSTN-210ENST00000465223 TMEM184AQ6ZMB5 413 aa17.62■□□□□ 0.41
NCSTN-210ENST00000465223 RUFY4Q6ZNE9 571 aa17.62■□□□□ 0.41
NCSTN-210ENST00000465223 TRIM50Q86XT4 487 aa17.62■□□□□ 0.41
NCSTN-210ENST00000465223 LMBR1Q8WVP7 490 aa17.62■□□□□ 0.41
NCSTN-210ENST00000465223 R4GN57 208 aa17.62■□□□□ 0.41
NCSTN-210ENST00000465223 CCDC171Q6TFL3 1326 aa17.62■□□□□ 0.41
NCSTN-210ENST00000465223 ZFHX4Q86UP3 3567 aa17.61■□□□□ 0.41
NCSTN-210ENST00000465223 SNHG28P0DPA3 235 aa17.61■□□□□ 0.41
NCSTN-210ENST00000465223 NPR3P17342 541 aa17.61■□□□□ 0.41
NCSTN-210ENST00000465223 AOC1P19801 751 aa17.61■□□□□ 0.41
NCSTN-210ENST00000465223 RRP12Q5JTH9 1297 aaKnown RBP17.61■□□□□ 0.41
NCSTN-210ENST00000465223 MCF2L2Q86YR7 1114 aa17.61■□□□□ 0.41
NCSTN-210ENST00000465223 NPAS4Q8IUM7 802 aa17.61■□□□□ 0.41
NCSTN-210ENST00000465223 DCLK2Q8N568 766 aa17.61■□□□□ 0.41
NCSTN-210ENST00000465223 DTWD2Q8NBA8 298 aa17.61■□□□□ 0.41
NCSTN-210ENST00000465223 HINFPQ9BQA5 517 aa17.61■□□□□ 0.41
NCSTN-210ENST00000465223 AGO3Q9H9G7 860 aaKnown RBP17.61■□□□□ 0.41
NCSTN-210ENST00000465223 TOMM22Q9NS69 142 aa17.61■□□□□ 0.41
NCSTN-210ENST00000465223 LOXHD1Q8IVV2 1947 aa17.6■□□□□ 0.41
NCSTN-210ENST00000465223 FSCN2O14926 492 aa17.6■□□□□ 0.41
NCSTN-210ENST00000465223 ORC4O43929 436 aa17.6■□□□□ 0.41
NCSTN-210ENST00000465223 CFBP00751 764 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms