RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 H0Y8X5 98 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 ENPP3O14638 875 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 DIAPH1O60610 1272 aaKnown RBP6.58□□□□□ -1.36
COPS3-204ENST00000462236 CPP00450 1065 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 ESR1P03372 595 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 PPP2R2AP63151 447 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 PPP2R5DQ14738 602 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 RRS1Q15050 365 aaKnown RBP6.58□□□□□ -1.36
COPS3-204ENST00000462236 TMEM67Q5HYA8 995 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 ANGEL2Q5VTE6 544 aaKnown RBP6.58□□□□□ -1.36
COPS3-204ENST00000462236 GTF2IRD2BQ6EKJ0 949 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 GTF2IRD2Q86UP8 949 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 SH3TC2Q8TF17 1288 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 CCDC120Q96HB5 630 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 COG3Q96JB2 828 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 RNPC3Q96LT9 517 aaKnown RBP6.58□□□□□ -1.36
COPS3-204ENST00000462236 ZDHHC15Q96MV8 337 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 ATP13A1Q9HD20 1204 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 ARHGEF4Q9NR80 690 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 RNF181Q9P0P0 153 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 CCDC39Q9UFE4 941 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 TCFL5Q9UL49 500 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 ZNF281Q9Y2X9 895 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 SMG6Q86US8 1419 aaKnown RBP6.58□□□□□ -1.36
COPS3-204ENST00000462236 FLT4P35916 1363 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 DNAJC25-GNG10A0A024R161 153 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 FYB1O15117 783 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 FOXN1O15353 648 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 RPS6KA4O75676 772 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 KCNH1O95259 989 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 MAP4K2Q12851 820 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 HSP90AB2PQ58FF8 381 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 EEF1DP3Q658K8 133 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 RCSD1Q6JBY9 416 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 JAZF1Q86VZ6 243 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 CREG2Q8IUH2 290 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 SCUBE1Q8IWY4 988 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 IPO9Q96P70 1041 aaKnown RBP6.57□□□□□ -1.36
COPS3-204ENST00000462236 TESK2Q96S53 571 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 SLC12A9Q9BXP2 914 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 TMEM260Q9NX78 707 aa6.57□□□□□ -1.36
COPS3-204ENST00000462236 TRBV23OR9-2A0A075B6M9 112 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 AURKAO14965 403 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 SYPP08247 313 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 VEGFAP15692 232 aaPredicted RBP6.56□□□□□ -1.36
COPS3-204ENST00000462236 RGS19P49795 217 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 TEKQ02763 1124 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 EGR3Q06889 387 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 DDR1Q08345 913 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 IKZF1Q13422 519 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 DALRD3Q5D0E6 543 aaKnown RBP6.56□□□□□ -1.36
COPS3-204ENST00000462236 SDE2Q6IQ49 451 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 CRTC3Q6UUV7 619 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 HOMER1Q86YM7 354 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 FCRL3Q96P31 734 aaPredicted RBP6.56□□□□□ -1.36
COPS3-204ENST00000462236 ANGEL1Q9UNK9 670 aaKnown RBP6.56□□□□□ -1.36
COPS3-204ENST00000462236 PCDHA11Q9Y5I1 949 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 POLR2AP24928 1970 aaKnown RBP6.56□□□□□ -1.36
COPS3-204ENST00000462236 UBR2Q8IWV8 1755 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 CNTNAP1P78357 1384 aa6.56□□□□□ -1.36
COPS3-204ENST00000462236 MEIS1O00470 390 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 MED26O95402 600 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 FAM153BP0C7A2 387 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 PABPC1P11940 636 aaKnown RBP6.55□□□□□ -1.36
COPS3-204ENST00000462236 HSD3B2P26439 372 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 TM4SF1P30408 202 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 SSTR4P31391 388 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 GFRA1P56159 465 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 LRP8Q14114 963 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 TESK1Q15569 626 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 CYP2R1Q6VVX0 501 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 AGBL5Q8NDL9 886 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 BTN2A2Q8WVV5 523 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 KCTD13Q8WZ19 329 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 APPBP2Q92624 585 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 COPS5Q92905 334 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 FOXP3Q9BZS1 431 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 TMX1Q9H3N1 280 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 TMOD3Q9NYL9 352 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 BACE2Q9Y5Z0 518 aa6.55□□□□□ -1.36
COPS3-204ENST00000462236 MRPL42Q9Y6G3 142 aaKnown RBP6.55□□□□□ -1.36
COPS3-204ENST00000462236 PASKQ96RG2 1323 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 USP42Q9H9J4 1324 aaKnown RBP6.54□□□□□ -1.36
COPS3-204ENST00000462236 C2orf71A6NGG8 1288 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 WASH4PA8MWX3 477 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 POLRMTO00411 1230 aaKnown RBP6.54□□□□□ -1.36
COPS3-204ENST00000462236 VAMP4O75379 141 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 CLSTN1O94985 981 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 CD3EP07766 207 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 CD8BP10966 210 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 PHKG2P15735 406 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 FUT4P22083 530 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 CHRNA5P30532 468 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 SUMO1P63165 101 aaKnown RBP6.54□□□□□ -1.36
COPS3-204ENST00000462236 DUSP4Q13115 394 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 RTP2Q5QGT7 225 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 ACBD5Q5T8D3 534 aaPredicted RBP6.54□□□□□ -1.36
COPS3-204ENST00000462236 E4F1Q66K89 784 aaPredicted RBP6.54□□□□□ -1.36
COPS3-204ENST00000462236 IQCEQ6IPM2 695 aa6.54□□□□□ -1.36
COPS3-204ENST00000462236 SLC23A3Q6PIS1 610 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms