RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 SLC5A1P13866 664 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 POLR2BP30876 1174 aaKnown RBP9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 ZNF804AQ7Z570 1209 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 UBE3DQ7Z6J8 389 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 FAM13CQ8NE31 585 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 SH3TC2Q8TF17 1288 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 DPF2Q92785 391 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 EAF2Q96CJ1 260 aaPredicted RBP9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 ATXN3LQ9H3M9 355 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 CYP4F12Q9HCS2 524 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 GPR108Q9NPR9 543 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 PICK1Q9NRD5 415 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 CNOT7Q9UIV1 285 aaKnown RBP9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 AP4E1Q9UPM8 1137 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 FPGT-TNNI3KV9GXZ4 949 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 FAM205AQ6ZU69 1335 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 ADAMTSL1Q8N6G6 1762 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 GNB5O14775 395 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 EPHX2P34913 555 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 ZNF280AP59817 542 aaPredicted RBP9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 SOX4Q06945 474 aaPredicted RBP9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 TTLL4Q14679 1199 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 NKG7Q16617 165 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 IGF2-ASQ6U949 168 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 HID1Q8IV36 788 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 AGBL3Q8NEM8 1001 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 ZNF507Q8TCN5 953 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 DBNDD2Q9BQY9 259 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 MRPL18Q9H0U6 180 aaKnown RBP9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 DCTPP1Q9H773 170 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 HACL1Q9UJ83 578 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 ARAP2Q8WZ64 1704 aa9.78□□□□□ -0.84
ECHDC1-212ENST00000461239 SCN4AP35499 1836 aa9.77□□□□□ -0.84
ECHDC1-212ENST00000461239 CEP350Q5VT06 3117 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 IQCA1LA6NCM1 817 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 HMMRO75330 724 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 ELNP15502 786 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 RAG1P15918 1043 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 RPS12P25398 132 aaKnown RBP9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 CAVIN4Q5BKX8 364 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 SLC6A19Q695T7 634 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 VHLLQ6RSH7 139 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 ST13P5Q8NFI4 369 aaPredicted RBP9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 KLHL6Q8WZ60 621 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 NEUROD6Q96NK8 337 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 CCDC8Q9H0W5 538 aaPredicted RBP9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 IL1RAPL2Q9NP60 686 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 DBNLQ9UJU6 430 aaKnown RBP9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 PCDHB10Q9UN67 800 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 PCDHAC2Q9Y5I4 1007 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 AOX1Q06278 1338 aa9.77□□□□□ -0.85
ECHDC1-212ENST00000461239 FAM86C2PA6NEL3 165 aa9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 TOMM70O94826 608 aa9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 IGHDP01880 384 aa9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 DRD2P14416 443 aa9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 CAP2P40123 477 aa9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 YARSP54577 528 aaKnown RBP9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 FKBP1AP62942 108 aaKnown RBP9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 OS9Q13438 667 aaPredicted RBP9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 SLBPQ14493 270 aaKnown RBP eCLIP9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 NCAPHQ15003 741 aa9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 MTERF2Q49AM1 385 aa9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 SPATC1Q76KD6 591 aa9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 JMYQ8N9B5 988 aa9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 ZBED3Q96IU2 234 aaPredicted RBP9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 ADARB2Q9NS39 739 aaKnown RBP9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 PGAP2Q9UHJ9 254 aa9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 ASTN2O75129 1339 aaPredicted RBP9.76□□□□□ -0.85
ECHDC1-212ENST00000461239 SPDYE3A6NKU9 549 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 RAB11FIP3O75154 756 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 NCLP19338 710 aaKnown RBP9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 CCNFP41002 786 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 MCAMP43121 646 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 CHAF1AQ13111 956 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 HDAC1Q13547 482 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 TBC1D10BQ4KMP7 808 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 PLEKHG4Q58EX7 1191 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 MFSD14BQ5SR56 506 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 USP50Q70EL3 339 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 ERC1Q8IUD2 1116 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 AGGF1Q8N302 714 aaeCLIP9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 C2CD4AQ8NCU7 369 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 ISL2Q96A47 359 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 ZNF669Q96BR6 464 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 KIF1BPQ96EK5 621 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 DPH2Q9BQC3 489 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 HMG20BQ9P0W2 317 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 ZNF214Q9UL59 606 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 MKL2Q9ULH7 1088 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 ACTL7BQ9Y614 415 aa9.75□□□□□ -0.85
ECHDC1-212ENST00000461239 F8W031 263 aaPredicted RBP9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 F8W735 103 aaPredicted RBP9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 H7C1D1 291 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 RGS13O14921 159 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 SQSTM1Q13501 440 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 HSP90AB4PQ58FF6 505 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 DLK2Q6UY11 383 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 DYMQ7RTS9 669 aa9.74□□□□□ -0.85
ECHDC1-212ENST00000461239 AACSQ86V21 672 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms