RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 LIG3P49916 1009 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 MARSP56192 900 aaKnown RBP13.29□□□□□ -0.28
GCOM1-203ENST00000460962 ADAM9Q13443 819 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 PICALMQ13492 652 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 PTF1AQ7RTS3 328 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 ADGRF4Q8IZF3 695 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 CASKIN2Q8WXE0 1202 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 UIMC1Q96RL1 719 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 ZHX3Q9H4I2 956 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 AIPL1Q9NZN9 384 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 SAMM50Q9Y512 469 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 ZEB2O60315 1214 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 SNHG28P0DPA3 235 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 AKR1B1P15121 316 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 DPP8Q6V1X1 898 aaPredicted RBP13.29□□□□□ -0.28
GCOM1-203ENST00000460962 MREGQ8N565 214 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 CNBD1Q8NA66 436 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 WHAMMQ8TF30 809 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 EMILIN3Q9NT22 766 aa13.29□□□□□ -0.28
GCOM1-203ENST00000460962 NPHP3-ACAD11A0A0J9YXS1 232 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 CETN3O15182 167 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 CLSTN1O94985 981 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 ZNF543Q08ER8 600 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 CDC37Q16543 378 aaPredicted RBP13.28□□□□□ -0.28
GCOM1-203ENST00000460962 KLHL7Q8IXQ5 586 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 SCFD1Q8WVM8 642 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
GCOM1-203ENST00000460962 PLIN4Q96Q06 1357 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 POTEB3A0JP26 581 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 POTECB2RU33 542 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 KCNK3O14649 394 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 PPP1R11O60927 126 aaPredicted RBP13.28□□□□□ -0.28
GCOM1-203ENST00000460962 CLK2P49760 499 aaKnown RBP13.28□□□□□ -0.28
GCOM1-203ENST00000460962 KCNH2Q12809 1159 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 HYIQ5T013 277 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 POTEBQ6S5H4 581 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 AMIGO3Q86WK7 504 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 USP38Q8NB14 1042 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 RPGRQ92834 1020 aaKnown RBP13.28□□□□□ -0.28
GCOM1-203ENST00000460962 FAM163AQ96GL9 167 aaPredicted RBP13.28□□□□□ -0.28
GCOM1-203ENST00000460962 GANQ9H2C0 597 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 PSTPIP2Q9H939 334 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 PCDHA2Q9Y5H9 948 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 RAD51CO43502 376 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 TTLL1O95922 423 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 IL1R1P14778 569 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 RFC4P35249 363 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 RPS6KA1Q15418 735 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 ICE2Q659A1 982 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 KDM7AQ6ZMT4 941 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 SPAG5Q96R06 1193 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 KCTD10Q9H3F6 313 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 GGA1Q9UJY5 639 aa13.28□□□□□ -0.28
GCOM1-203ENST00000460962 CCNL1Q9UK58 526 aaPredicted RBP13.28□□□□□ -0.28
GCOM1-203ENST00000460962 GAKO14976 1311 aa13.27□□□□□ -0.28
GCOM1-203ENST00000460962 ATP2B4P23634 1241 aa13.27□□□□□ -0.28
GCOM1-203ENST00000460962 NR2F2P24468 414 aa13.27□□□□□ -0.28
GCOM1-203ENST00000460962 HLTFQ14527 1009 aaKnown RBP eCLIP13.27□□□□□ -0.28
GCOM1-203ENST00000460962 TTBK2Q6IQ55 1244 aa13.27□□□□□ -0.28
GCOM1-203ENST00000460962 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.28
GCOM1-203ENST00000460962 B4GALNT4Q76KP1 1039 aa13.27□□□□□ -0.28
GCOM1-203ENST00000460962 MAATS1Q7Z4T9 603 aa13.27□□□□□ -0.28
GCOM1-203ENST00000460962 CYP11B2P19099 503 aa13.27□□□□□ -0.29
GCOM1-203ENST00000460962 NR1D1P20393 614 aa13.27□□□□□ -0.29
GCOM1-203ENST00000460962 INPP5BP32019 993 aa13.27□□□□□ -0.29
GCOM1-203ENST00000460962 SLC16A2P36021 539 aa13.27□□□□□ -0.29
GCOM1-203ENST00000460962 CD302Q8IX05 232 aa13.27□□□□□ -0.29
GCOM1-203ENST00000460962 TBC1D22AQ8WUA7 517 aa13.27□□□□□ -0.29
GCOM1-203ENST00000460962 RNPC3Q96LT9 517 aaKnown RBP13.27□□□□□ -0.29
GCOM1-203ENST00000460962 NAP1L4Q99733 375 aaKnown RBP13.27□□□□□ -0.29
GCOM1-203ENST00000460962 POLD4Q9HCU8 107 aa13.27□□□□□ -0.29
GCOM1-203ENST00000460962 NHSQ6T4R5 1651 aa13.27□□□□□ -0.29
GCOM1-203ENST00000460962 MYH7BA7E2Y1 1941 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 ZBTB5O15062 677 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 PTK2Q05397 1052 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 TRADDQ15628 312 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 IFI16Q16666 785 aaKnown RBP13.26□□□□□ -0.29
GCOM1-203ENST00000460962 EDRF1Q3B7T1 1238 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 C10orf76Q5T2E6 689 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 PIK3R5Q8WYR1 880 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 HDAC9Q9UKV0 1011 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 GOLGA6L10A6NI86 522 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 KIAA0754O94854 1291 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 ACTN1P12814 892 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 LSP1P33241 339 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 GUCY1A3Q02108 690 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 ATP6V1G3Q96LB4 118 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 TAF1DQ9H5J8 278 aaPredicted RBP13.26□□□□□ -0.29
GCOM1-203ENST00000460962 DAGLAQ9Y4D2 1042 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 IGKV6D-41A0A0C4DH26 115 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 USP17L10C9JJH3 530 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 KIF4AO95239 1232 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 GABPAQ06546 454 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 CEP85LQ5SZL2 805 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 GPATCH4Q5T3I0 446 aaKnown RBP13.26□□□□□ -0.29
GCOM1-203ENST00000460962 ARMCX3Q9UH62 379 aaPredicted RBP13.26□□□□□ -0.29
GCOM1-203ENST00000460962 PLAAQ9Y263 795 aa13.26□□□□□ -0.29
GCOM1-203ENST00000460962 BZW2Q9Y6E2 419 aaKnown RBP13.26□□□□□ -0.29
GCOM1-203ENST00000460962 BTNL10A8MVZ5 291 aa13.25□□□□□ -0.29
GCOM1-203ENST00000460962 HMGB1P1B2RPK0 211 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms