RNA–Protein interactions for RNA: ENST00000460563.5

HMGN2-202, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,045 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-202ENST00000460563 AP5M1Q9H0R1 490 aa12.75□□□□□ -0.37
HMGN2-202ENST00000460563 WNT8AQ9H1J5 351 aa12.75□□□□□ -0.37
HMGN2-202ENST00000460563 HIPK3Q9H422 1215 aa12.75□□□□□ -0.37
HMGN2-202ENST00000460563 ZNF395Q9H8N7 513 aaPredicted RBP12.75□□□□□ -0.37
HMGN2-202ENST00000460563 SERTAD1Q9UHV2 236 aa12.75□□□□□ -0.37
HMGN2-202ENST00000460563 RBM19Q9Y4C8 960 aaKnown RBP12.75□□□□□ -0.37
HMGN2-202ENST00000460563 KIAA1217Q5T5P2 1943 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 REV3LO60673 3130 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 CHD9Q3L8U1 2897 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 FGAP02671 866 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 FGRP09769 529 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 ALX1Q15699 326 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 SWI5Q1ZZU3 235 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 PKDCCQ504Y2 493 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 PSRC1Q6PGN9 363 aaPredicted RBP12.74□□□□□ -0.37
HMGN2-202ENST00000460563 KIAA1211Q6ZU35 1233 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 OTOP2Q7RTS6 562 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 TBC1D10CQ8IV04 446 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 MORC4Q8TE76 937 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 CLP1Q92989 425 aaKnown RBP12.74□□□□□ -0.37
HMGN2-202ENST00000460563 NOC4LQ9BVI4 516 aaKnown RBP12.74□□□□□ -0.37
HMGN2-202ENST00000460563 PRDM12Q9H4Q4 367 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 VTA1Q9NP79 307 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 IL23AQ9NPF7 189 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 CHD7Q9P2D1 2997 aa12.74□□□□□ -0.37
HMGN2-202ENST00000460563 PTPDC1A2A3K4 754 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 RBAK-RBAKDNI3L0D1 243 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 CABYRO75952 493 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 HSPD1P10809 573 aaKnown RBP12.73□□□□□ -0.37
HMGN2-202ENST00000460563 PDHBP11177 359 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 TOP1P11387 765 aaKnown RBP12.73□□□□□ -0.37
HMGN2-202ENST00000460563 CALML3P27482 149 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 EPHA4P54764 986 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 CLN3Q13286 438 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 IQSEC1Q6DN90 963 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 BTNL9Q6UXG8 535 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 CLEC4DQ8WXI8 215 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 HERVK_113Q902F9 699 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 VWCEQ96DN2 955 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 SCLYQ96I15 445 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 NKX2-4Q9H2Z4 354 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 CPVLQ9H3G5 476 aa12.73□□□□□ -0.37
HMGN2-202ENST00000460563 YBX2Q9Y2T7 364 aaKnown RBP12.73□□□□□ -0.37
HMGN2-202ENST00000460563 TRIP12Q14669 1992 aaPredicted RBP12.72□□□□□ -0.37
HMGN2-202ENST00000460563 NEDD4P46934 1319 aa12.72□□□□□ -0.37
HMGN2-202ENST00000460563 CCDC171Q6TFL3 1326 aa12.72□□□□□ -0.37
HMGN2-202ENST00000460563 RABGGTBP53611 331 aa12.72□□□□□ -0.37
HMGN2-202ENST00000460563 PDE4CQ08493 712 aa12.72□□□□□ -0.37
HMGN2-202ENST00000460563 ADGRE1Q14246 886 aa12.72□□□□□ -0.37
HMGN2-202ENST00000460563 DUSP28Q4G0W2 176 aa12.72□□□□□ -0.37
HMGN2-202ENST00000460563 MCMDC2Q4G0Z9 681 aa12.72□□□□□ -0.37
HMGN2-202ENST00000460563 LINC00528Q8N1L1 170 aa12.72□□□□□ -0.37
HMGN2-202ENST00000460563 ZKSCAN3Q9BRR0 538 aa12.72□□□□□ -0.37
HMGN2-202ENST00000460563 ESYT1Q9BSJ8 1104 aa12.72□□□□□ -0.37
HMGN2-202ENST00000460563 WDR11Q9BZH6 1224 aa12.72□□□□□ -0.37
HMGN2-202ENST00000460563 TRMT13Q9NUP7 481 aaKnown RBP12.72□□□□□ -0.37
HMGN2-202ENST00000460563 TET1Q8NFU7 2136 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 COL4A4P53420 1690 aaPredicted RBP12.71□□□□□ -0.37
HMGN2-202ENST00000460563 ZMYM6O95789 1325 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 ZEB2O60315 1214 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 FGBP02675 491 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 MYL3P08590 195 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 GOLGA8HP0CJ92 632 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 CYP2C9P11712 490 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 MYOGP15173 224 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 SMCPP49901 116 aaPredicted RBP12.71□□□□□ -0.37
HMGN2-202ENST00000460563 ZNF543Q08ER8 600 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 OR6J1Q8NGC5 347 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 COPS5Q92905 334 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 ALDH8A1Q9H2A2 487 aaPredicted RBP12.71□□□□□ -0.37
HMGN2-202ENST00000460563 TCP11L1Q9NUJ3 509 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 Q9Y3F1 56 aa12.71□□□□□ -0.37
HMGN2-202ENST00000460563 MYH7BA7E2Y1 1941 aa12.7□□□□□ -0.38
HMGN2-202ENST00000460563 MEN1O00255 615 aa12.7□□□□□ -0.38
HMGN2-202ENST00000460563 BMP1P13497 986 aa12.7□□□□□ -0.38
HMGN2-202ENST00000460563 RPS6P62753 249 aaKnown RBP12.7□□□□□ -0.38
HMGN2-202ENST00000460563 PURAQ00577 322 aaKnown RBP12.7□□□□□ -0.38
HMGN2-202ENST00000460563 HDAC1Q13547 482 aaPredicted RBP12.7□□□□□ -0.38
HMGN2-202ENST00000460563 CCDC85BQ15834 202 aaPredicted RBP12.7□□□□□ -0.38
HMGN2-202ENST00000460563 USH1GQ495M9 461 aa12.7□□□□□ -0.38
HMGN2-202ENST00000460563 AKNAD1Q5T1N1 836 aa12.7□□□□□ -0.38
HMGN2-202ENST00000460563 RNF207Q6ZRF8 634 aa12.7□□□□□ -0.38
HMGN2-202ENST00000460563 RILPL2Q969X0 211 aa12.7□□□□□ -0.38
HMGN2-202ENST00000460563 GAS2L1Q99501 681 aaPredicted RBP12.7□□□□□ -0.38
HMGN2-202ENST00000460563 ADD3Q9UEY8 706 aaKnown RBP12.7□□□□□ -0.38
HMGN2-202ENST00000460563 TCF20Q9UGU0 1960 aaKnown RBP12.7□□□□□ -0.38
HMGN2-202ENST00000460563 TNKSO95271 1327 aa12.69□□□□□ -0.38
HMGN2-202ENST00000460563 RBM47A0AV96 593 aaKnown RBP12.69□□□□□ -0.38
HMGN2-202ENST00000460563 BACH1O14867 736 aa12.69□□□□□ -0.38
HMGN2-202ENST00000460563 ARIH2O95376 493 aa12.69□□□□□ -0.38
HMGN2-202ENST00000460563 SNHG28P0DPA3 235 aa12.69□□□□□ -0.38
HMGN2-202ENST00000460563 TTLL4Q14679 1199 aa12.69□□□□□ -0.38
HMGN2-202ENST00000460563 RAB30Q15771 203 aa12.69□□□□□ -0.38
HMGN2-202ENST00000460563 OCLNQ16625 522 aa12.69□□□□□ -0.38
HMGN2-202ENST00000460563 CTC1Q2NKJ3 1217 aa12.69□□□□□ -0.38
HMGN2-202ENST00000460563 B4GALNT3Q6L9W6 998 aa12.69□□□□□ -0.38
HMGN2-202ENST00000460563 PHLDB3Q6NSJ2 640 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms