RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 IQCB1Q15051 598 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 PRRT2Q7Z6L0 340 aaPredicted RBP11.54□□□□□ -0.56
HERC4-207ENST00000460168 TRIML1Q8N9V2 468 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 REPS2Q8NFH8 660 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 SPATA20Q8TB22 786 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 ETNPPLQ8TBG4 499 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 OPTNQ96CV9 577 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 GSDMAQ96QA5 445 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 TEX13BQ9BXU2 312 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 ZNF446Q9NWS9 450 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 RABGAP1Q9Y3P9 1069 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 RIPK3Q9Y572 518 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 RBBP6Q7Z6E9 1792 aaKnown RBP11.53□□□□□ -0.56
HERC4-207ENST00000460168 CXCL11O14625 94 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 PPIL2Q13356 520 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 CUL4BQ13620 913 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 TTC31Q49AM3 519 aaPredicted RBP11.53□□□□□ -0.56
HERC4-207ENST00000460168 CEP55Q53EZ4 464 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 AP1ARQ63HQ0 302 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 RNF207Q6ZRF8 634 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 DHX40Q8IX18 779 aaKnown RBP11.53□□□□□ -0.56
HERC4-207ENST00000460168 SAMD3Q8N6K7 520 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 TSC1Q92574 1164 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 FAM20AQ96MK3 541 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 MTRQ99707 1265 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 MAGEF1Q9HAY2 307 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 FAM53CQ9NYF3 392 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 COL20A1Q9P218 1284 aa11.53□□□□□ -0.56
HERC4-207ENST00000460168 IGLV3-22A0A075B6J6 115 aa11.52□□□□□ -0.56
HERC4-207ENST00000460168 MSH4O15457 936 aa11.52□□□□□ -0.56
HERC4-207ENST00000460168 CTIFO43310 598 aaKnown RBP11.52□□□□□ -0.56
HERC4-207ENST00000460168 GTPBP6O43824 516 aaPredicted RBP11.52□□□□□ -0.56
HERC4-207ENST00000460168 FAM200BP0CF97 657 aa11.52□□□□□ -0.56
HERC4-207ENST00000460168 FMR1Q06787 632 aaKnown RBP eCLIP11.52□□□□□ -0.56
HERC4-207ENST00000460168 PLA2G4DQ86XP0 818 aa11.52□□□□□ -0.56
HERC4-207ENST00000460168 SYTL5Q8TDW5 730 aaPredicted RBP11.52□□□□□ -0.56
HERC4-207ENST00000460168 FAXDC2Q96IV6 333 aa11.52□□□□□ -0.56
HERC4-207ENST00000460168 BPIFA3Q9BQP9 254 aa11.52□□□□□ -0.56
HERC4-207ENST00000460168 DACH1Q9UI36 760 aa11.52□□□□□ -0.56
HERC4-207ENST00000460168 ATP2A1O14983 1001 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 ADCY5O95622 1261 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 BMP6P22004 513 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 CCT6AP40227 531 aaKnown RBP11.52□□□□□ -0.57
HERC4-207ENST00000460168 STAT3P40763 770 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 GHRHRQ02643 423 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 MORC3Q14149 939 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 DHX8Q14562 1220 aaKnown RBP11.52□□□□□ -0.57
HERC4-207ENST00000460168 HSP90B2PQ58FF3 399 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 SLC30A10Q6XR72 485 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 MLKLQ8NB16 471 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 SLC10A4Q96EP9 437 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 AGAP3Q96P47 875 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 KBTBD4Q9NVX7 518 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 KCNH4Q9UQ05 1017 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 LOC285556D6RIA3 1793 aa11.52□□□□□ -0.57
HERC4-207ENST00000460168 KDM3AQ9Y4C1 1321 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 MYL1P05976 194 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 HOXA7P31268 230 aaPredicted RBP11.51□□□□□ -0.57
HERC4-207ENST00000460168 AMPD3Q01432 767 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 GRB10Q13322 594 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 BAATQ14032 418 aaPredicted RBP11.51□□□□□ -0.57
HERC4-207ENST00000460168 HAUS3Q68CZ6 603 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 TTC19Q6DKK2 380 aaPredicted RBP11.51□□□□□ -0.57
HERC4-207ENST00000460168 NCAPH2Q6IBW4 605 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 C10orf67Q8IYJ2 551 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 LRRC15Q8TF66 581 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 LARP4BQ92615 738 aaKnown RBP11.51□□□□□ -0.57
HERC4-207ENST00000460168 RMDN3Q96TC7 470 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 NUDT12Q9BQG2 462 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 NT5C3AQ9H0P0 336 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 ACAD9Q9H845 621 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 RMND1Q9NWS8 449 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 STK17AQ9UEE5 414 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 RPTORQ8N122 1335 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 SMTNL1A8MU46 457 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 RPN1P04843 607 aaKnown RBP11.51□□□□□ -0.57
HERC4-207ENST00000460168 EIF2AK2P19525 551 aaKnown RBP11.51□□□□□ -0.57
HERC4-207ENST00000460168 PEX19P40855 299 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 RWDD2BP57060 319 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 TPM4P67936 248 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 LDLRAD1Q5T700 205 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 MAMSTRQ6ZN01 415 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 SV2BQ7L1I2 683 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 FASTKD5Q7L8L6 764 aaKnown RBP11.51□□□□□ -0.57
HERC4-207ENST00000460168 MB21D1Q8N884 522 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 CCDC26Q8TAB7 109 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 ERMNQ8TAM6 284 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 TAAR1Q96RJ0 339 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 AGTPBP1Q9UPW5 1226 aa11.51□□□□□ -0.57
HERC4-207ENST00000460168 PPFIA4O75335 1185 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 SPIRE1Q08AE8 756 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 TKFCQ3LXA3 575 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 ARHGEF16Q5VV41 709 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 PCNX4Q63HM2 1172 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 LBX2Q6XYB7 198 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 IL31RAQ8NI17 732 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 PNMA5Q96PV4 448 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 MXRA8Q9BRK3 442 aa11.5□□□□□ -0.57
HERC4-207ENST00000460168 ZNF577Q9BSK1 485 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms