RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SRRDQ9UH36 339 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 ITIH6Q6UXX5 1313 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 KCNJ18B7U540 433 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 CCP110O43303 1012 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 STX10O60499 249 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 ERCC3P19447 782 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 MAPK4P31152 587 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 COPB1P53618 953 aaKnown RBP11.96□□□□□ -0.49
PKP4-206ENST00000452162 PRKCZQ05513 592 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 KCNJ12Q14500 433 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 ARHGEF6Q15052 776 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 GPR142Q7Z601 462 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 IRF2BP1Q8IU81 584 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 TSC1Q92574 1164 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 HAS1Q92839 578 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 DDX25Q9UHL0 483 aaKnown RBP11.96□□□□□ -0.49
PKP4-206ENST00000452162 PTPN22Q9Y2R2 807 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 RIPK3Q9Y572 518 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 CTDP1Q9Y5B0 961 aaPredicted RBP11.96□□□□□ -0.49
PKP4-206ENST00000452162 PCDHA1Q9Y5I3 950 aa11.96□□□□□ -0.49
PKP4-206ENST00000452162 ZNF536O15090 1300 aa11.96□□□□□ -0.5
PKP4-206ENST00000452162 TRIM49BA6NDI0 452 aa11.96□□□□□ -0.5
PKP4-206ENST00000452162 POTEMA6NI47 508 aa11.96□□□□□ -0.5
PKP4-206ENST00000452162 TAL1P17542 331 aaPredicted RBP11.96□□□□□ -0.5
PKP4-206ENST00000452162 PMS1P54277 932 aaKnown RBP11.96□□□□□ -0.5
PKP4-206ENST00000452162 TMEM119Q4V9L6 283 aa11.96□□□□□ -0.5
PKP4-206ENST00000452162 SNRNP48Q6IEG0 339 aaKnown RBP11.96□□□□□ -0.5
PKP4-206ENST00000452162 CCDC174Q6PII3 467 aa11.96□□□□□ -0.5
PKP4-206ENST00000452162 NCAPG2Q86XI2 1143 aa11.96□□□□□ -0.5
PKP4-206ENST00000452162 RIOX2Q8IUF8 465 aa11.96□□□□□ -0.5
PKP4-206ENST00000452162 ZNF592Q92610 1267 aa11.96□□□□□ -0.5
PKP4-206ENST00000452162 PANX2Q96RD6 677 aa11.96□□□□□ -0.5
PKP4-206ENST00000452162 NAP1L4Q99733 375 aaKnown RBP11.96□□□□□ -0.5
PKP4-206ENST00000452162 RAB34Q9BZG1 259 aa11.96□□□□□ -0.5
PKP4-206ENST00000452162 GJD2Q9UKL4 321 aa11.96□□□□□ -0.5
PKP4-206ENST00000452162 AKR1B15C9JRZ8 316 aaPredicted RBP11.95□□□□□ -0.5
PKP4-206ENST00000452162 PSMA7O14818 248 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 ATP2A1O14983 1001 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 GNRH1P01148 92 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 CCT6AP40227 531 aaKnown RBP11.95□□□□□ -0.5
PKP4-206ENST00000452162 FLT3LGP49771 235 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 ASIC1P78348 528 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 RBM10P98175 930 aaKnown RBP11.95□□□□□ -0.5
PKP4-206ENST00000452162 AMPD3Q01432 767 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 STIM1Q13586 685 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 COBLL1Q53SF7 1204 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 TTI2Q6NXR4 508 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 USP17L6PQ6QN14 398 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 PLEKHH3Q7Z736 793 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 REXO1L1PQ8IX06 675 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 CCDC47Q96A33 483 aaKnown RBP11.95□□□□□ -0.5
PKP4-206ENST00000452162 DHTKD1Q96HY7 919 aaPredicted RBP11.95□□□□□ -0.5
PKP4-206ENST00000452162 AGBL1Q96MI9 1066 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 TEX13BQ9BXU2 312 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 GTPBP4Q9BZE4 634 aaKnown RBP11.95□□□□□ -0.5
PKP4-206ENST00000452162 RANBP17Q9H2T7 1088 aaKnown RBP11.95□□□□□ -0.5
PKP4-206ENST00000452162 EXOC1Q9NV70 894 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 PTCH2Q9Y6C5 1203 aa11.95□□□□□ -0.5
PKP4-206ENST00000452162 MEIS2O14770 477 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 TUBB4AP04350 444 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 FDX1P10109 184 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 HOXD10P28358 340 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 PDE4DQ08499 809 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 RBL2Q08999 1139 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 SHCBP1Q8NEM2 672 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 KIF18AQ8NI77 898 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 CRYGNQ8WXF5 182 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 MBOAT7Q96N66 472 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 NUDT12Q9BQG2 462 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 ANO3Q9BYT9 981 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 THAP9Q9H5L6 903 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 TAB2Q9NYJ8 693 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 CYP3A7-CYP3A51PA0A087WV96 503 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 N4BP3O15049 544 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 MFAP3LO75121 409 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 CYP3A7P24462 503 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 USP11P51784 963 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 AP3B2Q13367 1082 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 MCM6Q14566 821 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 PKN2Q16513 984 aaKnown RBP11.94□□□□□ -0.5
PKP4-206ENST00000452162 CNNM4Q6P4Q7 775 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 FBXO46Q6PJ61 603 aaPredicted RBP11.94□□□□□ -0.5
PKP4-206ENST00000452162 SV2BQ7L1I2 683 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 PPFIBP1Q86W92 1011 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 ANKRD20A12PQ8NF67 263 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 SNX29Q8TEQ0 813 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 RAD54LQ92698 747 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 DUSP9Q99956 384 aaKnown RBP11.94□□□□□ -0.5
PKP4-206ENST00000452162 AMNQ9BXJ7 453 aa11.94□□□□□ -0.5
PKP4-206ENST00000452162 MYMKA6NI61 221 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 SLC25A27O95847 323 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 GYPCP04921 128 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 FECHP22830 423 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 CCNE1P24864 410 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 EEF1GP26641 437 aaKnown RBP11.93□□□□□ -0.5
PKP4-206ENST00000452162 OAZ1P54368 228 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 STK4Q13043 487 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 MORN1Q5T089 497 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 KRT79Q5XKE5 535 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms