RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 SCFD1Q8WVM8 642 aa15.61■□□□□ 0.09
ERCC3-203ENST00000445889 CCT8L2Q96SF2 557 aa15.61■□□□□ 0.09
ERCC3-203ENST00000445889 STK17AQ9UEE5 414 aa15.61■□□□□ 0.09
ERCC3-203ENST00000445889 AMACRQ9UHK6 382 aa15.61■□□□□ 0.09
ERCC3-203ENST00000445889 AKR1B1P15121 316 aa15.61■□□□□ 0.09
ERCC3-203ENST00000445889 PSMC6P62333 389 aa15.61■□□□□ 0.09
ERCC3-203ENST00000445889 RNF10Q8N5U6 811 aaKnown RBP15.61■□□□□ 0.09
ERCC3-203ENST00000445889 ZNF473Q8WTR7 871 aaKnown RBP15.61■□□□□ 0.09
ERCC3-203ENST00000445889 POTEFA5A3E0 1075 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 SFI1A8K8P3 1242 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 PPP1R2P41236 205 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 FXR2P51116 673 aaKnown RBP eCLIP15.6■□□□□ 0.09
ERCC3-203ENST00000445889 RPS6KA1Q15418 735 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 ASIC2Q16515 512 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 CDC37Q16543 378 aaPredicted RBP15.6■□□□□ 0.09
ERCC3-203ENST00000445889 ZCWPW2Q504Y3 356 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 ODF2Q5BJF6 829 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 SLC10A5Q5PT55 438 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 POTEGQ6S5H5 508 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 POTEEQ6S8J3 1075 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 B4GALNT4Q76KP1 1039 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 SUGP1Q8IWZ8 645 aaKnown RBP15.6■□□□□ 0.09
ERCC3-203ENST00000445889 USP38Q8NB14 1042 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 UBLCP1Q8WVY7 318 aaPredicted RBP15.6■□□□□ 0.09
ERCC3-203ENST00000445889 TAF4BQ92750 862 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 SPAG5Q96R06 1193 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 LZTS2Q9BRK4 669 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 DPH5Q9H2P9 285 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 EMILIN3Q9NT22 766 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 BCS1LQ9Y276 419 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 USP17L10C9JJH3 530 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 MEFVO15553 781 aaPredicted RBP15.6■□□□□ 0.09
ERCC3-203ENST00000445889 SHROOM1Q2M3G4 852 aaPredicted RBP15.6■□□□□ 0.09
ERCC3-203ENST00000445889 C16orf86Q6ZW13 317 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 ADGRF4Q8IZF3 695 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 EPN3Q9H201 632 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 AJAP1Q9UKB5 411 aaPredicted RBP15.6■□□□□ 0.09
ERCC3-203ENST00000445889 DLEC1Q9Y238 1755 aa15.6■□□□□ 0.09
ERCC3-203ENST00000445889 MPHOSPH10O00566 681 aaKnown RBP15.59■□□□□ 0.09
ERCC3-203ENST00000445889 PPP1R37O75864 691 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 PLA2G4BP0C869 781 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 NR2F2P24468 414 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 HSD17B3P37058 310 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 KCNA1Q09470 495 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 FAM98CQ17RN3 349 aaKnown RBP15.59■□□□□ 0.09
ERCC3-203ENST00000445889 ATP6V1G3Q96LB4 118 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 RAB34Q9BZG1 259 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 RTCBQ9Y3I0 505 aaKnown RBP15.59■□□□□ 0.09
ERCC3-203ENST00000445889 CLIC2O15247 247 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 DAPK3O43293 454 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 PABPC4Q13310 644 aaKnown RBP eCLIP15.59■□□□□ 0.098e-8■■■■■ 36.2
ERCC3-203ENST00000445889 SPRED3Q2MJR0 410 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 GLE1Q53GS7 698 aaKnown RBP15.59■□□□□ 0.09
ERCC3-203ENST00000445889 MFSD14BQ5SR56 506 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 KDM7AQ6ZMT4 941 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 JMJD4Q9H9V9 463 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 RIC8AQ9NPQ8 531 aa15.59■□□□□ 0.09
ERCC3-203ENST00000445889 FAM196BA6NMK8 535 aa15.58■□□□□ 0.09
ERCC3-203ENST00000445889 SART1O43290 800 aaKnown RBP15.58■□□□□ 0.09
ERCC3-203ENST00000445889 MDH1P40925 334 aaKnown RBP15.58■□□□□ 0.09
ERCC3-203ENST00000445889 UAP1Q16222 522 aaPredicted RBP15.58■□□□□ 0.09
ERCC3-203ENST00000445889 PTGISQ16647 500 aa15.58■□□□□ 0.09
ERCC3-203ENST00000445889 NLRP14Q86W24 1093 aa15.58■□□□□ 0.09
ERCC3-203ENST00000445889 TRIM59Q8IWR1 403 aa15.58■□□□□ 0.09
ERCC3-203ENST00000445889 IQCDQ96DY2 449 aa15.58■□□□□ 0.09
ERCC3-203ENST00000445889 MXD3Q9BW11 206 aa15.58■□□□□ 0.09
ERCC3-203ENST00000445889 RIOX1Q9H6W3 641 aa15.58■□□□□ 0.09
ERCC3-203ENST00000445889 CD248Q9HCU0 757 aa15.58■□□□□ 0.09
ERCC3-203ENST00000445889 BMP2KQ9NSY1 1161 aaPredicted RBP15.58■□□□□ 0.09
ERCC3-203ENST00000445889 NR2E1Q9Y466 385 aa15.58■□□□□ 0.09
ERCC3-203ENST00000445889 SPATA31A1Q5TZJ5 1347 aa15.58■□□□□ 0.09
ERCC3-203ENST00000445889 MYH1P12882 1939 aa15.58■□□□□ 0.08
ERCC3-203ENST00000445889 SNED1Q8TER0 1413 aa15.58■□□□□ 0.08
ERCC3-203ENST00000445889 UFL1O94874 794 aa15.58■□□□□ 0.08
ERCC3-203ENST00000445889 CTNNA1P35221 906 aaKnown RBP15.58■□□□□ 0.08
ERCC3-203ENST00000445889 SEMA3FQ13275 785 aa15.58■□□□□ 0.08
ERCC3-203ENST00000445889 PRPF4BQ13523 1007 aaKnown RBP15.58■□□□□ 0.08
ERCC3-203ENST00000445889 METTL13Q8N6R0 699 aa15.58■□□□□ 0.08
ERCC3-203ENST00000445889 RBM46Q8TBY0 533 aaKnown RBP15.58■□□□□ 0.08
ERCC3-203ENST00000445889 MYCBPAPQ8TBZ2 947 aa15.58■□□□□ 0.08
ERCC3-203ENST00000445889 RUBCNQ92622 972 aa15.58■□□□□ 0.08
ERCC3-203ENST00000445889 JPH2Q9BR39 696 aaPredicted RBP15.58■□□□□ 0.08
ERCC3-203ENST00000445889 CASZ1Q86V15 1759 aa15.58■□□□□ 0.08
ERCC3-203ENST00000445889 RBAK-RBAKDNI3L0D1 243 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 CASP4P49662 377 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 CYP4A11Q02928 519 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 ITGB3BPQ13352 177 aaPredicted RBP15.57■□□□□ 0.08
ERCC3-203ENST00000445889 QPCTQ16769 361 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 TMEM119Q4V9L6 283 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 PCDHGC5Q9Y5F6 944 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 RSPH10B2B2RC85 870 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 MED24O75448 989 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 RSPH10BP0C881 870 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 TNFRSF8P28908 595 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 ECHS1P30084 290 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 RFC4P35249 363 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 GPSM2P81274 684 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 COBLL1Q53SF7 1204 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 ALKBH5Q6P6C2 394 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms