RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 ZPBPQ9BS86 351 aa4.44□□□□□ -1.7
UBR3-206ENST00000444475 AGXT2Q9BYV1 514 aa4.44□□□□□ -1.7
UBR3-206ENST00000444475 TMEM60Q9H2L4 133 aa4.44□□□□□ -1.7
UBR3-206ENST00000444475 PRDM5Q9NQX1 630 aaPredicted RBP4.44□□□□□ -1.7
UBR3-206ENST00000444475 KIF16BQ96L93 1317 aa4.44□□□□□ -1.7
UBR3-206ENST00000444475 A0A1W2PQU0 124 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 NBPF26B4DH59 902 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 TUSC2O75896 110 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 HSPA6P17066 643 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 FGFR4P22455 802 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 PPP2R3AQ06190 1150 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 AP1B1Q10567 949 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 TRIM28Q13263 835 aaKnown RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 SUPT20HL1Q3ZLR7 823 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 TRIM68Q6AZZ1 485 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 PACS1Q6VY07 963 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 FGD2Q7Z6J4 655 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 PTRH1Q86Y79 214 aaKnown RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 CPOQ8IVL8 374 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 FERMT2Q96AC1 680 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 FAM81BQ96LP2 452 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 RBM14Q96PK6 669 aaKnown RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 EDEM3Q9BZQ6 932 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 ZWILCHQ9H900 591 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 GRHPRQ9UBQ7 328 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 SLC13A4Q9UKG4 626 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 LRCH1Q9Y2L9 728 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 A0A1W2PPH5 198 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 KRBA1A5PL33 1030 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 SUSD5O60279 629 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 FOXD2O60548 495 aaPredicted RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 STAM2O75886 525 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 MT-CO1P00395 513 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 PLATP00750 562 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 POLBP06746 335 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 VCAM1P19320 739 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 ATP4AP20648 1035 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 GUCY2CP25092 1073 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 HADHAP40939 763 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 FXR1P51114 621 aaKnown RBP eCLIP4.43□□□□□ -1.7
UBR3-206ENST00000444475 CLNS1AP54105 237 aaKnown RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 IFIT5Q13325 482 aaKnown RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 BLMHQ13867 455 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 RABEP1Q15276 862 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 MTFR1Q15390 333 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 FKBP15Q5T1M5 1219 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 CHRDL2Q6WN34 429 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 SAMD7Q7Z3H4 446 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 TTC6Q86TZ1 520 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 ANKLE2Q86XL3 938 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 ZFPM1Q8IX07 1006 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 CHST13Q8NET6 341 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 FBXO30Q8TB52 745 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 TTC9Q92623 222 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 ARL8AQ96BM9 186 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 COG8Q96MW5 612 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 SLC39A3Q9BRY0 314 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 NUCKS1Q9H1E3 243 aaKnown RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 SEMA6BQ9H3T3 888 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 ARFGAP3Q9NP61 516 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 CHORDC1Q9UHD1 332 aaPredicted RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 ADAMTS8Q9UP79 889 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 PASKQ96RG2 1323 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 AKNAQ7Z591 1439 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 CYP2D7A0A087X1C5 515 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 OPA1O60313 960 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 SRGAP2O75044 1071 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 STAU1O95793 577 aaKnown RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 F13A1P00488 732 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 CYP1A2P05177 515 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 PIK3CBP42338 1070 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 VEGFBP49765 207 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 INF2Q27J81 1249 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 CCDC38Q502W7 563 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 BTN2A1Q7KYR7 527 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 CCAR2Q8N163 923 aaKnown RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 TTLL11Q8NHH1 800 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 RFFLQ8WZ73 363 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 NSUN4Q96CB9 384 aaKnown RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 SCLYQ96I15 445 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 ZDHHC15Q96MV8 337 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 ZNF277Q9NRM2 450 aaPredicted RBP4.43□□□□□ -1.7
UBR3-206ENST00000444475 AASSQ9UDR5 926 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 PNMA3Q9UL41 463 aa4.43□□□□□ -1.7
UBR3-206ENST00000444475 CCDC69A6NI79 296 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 BTBD11A6QL63 1104 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 RNF113AO15541 343 aaKnown RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 SCTRP47872 440 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 AUHQ13825 339 aaKnown RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 SNAP47Q5SQN1 464 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 WDR73Q6P4I2 378 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 TXNDC11Q6PKC3 985 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 LRRTM4Q86VH4 590 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 ZNF295-AS1Q8N0V1 137 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 TRAPPC12Q8WVT3 735 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 GATAD2BQ8WXI9 593 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 KLHL6Q8WZ60 621 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 ERCC4Q92889 916 aaPredicted RBP4.42□□□□□ -1.7
UBR3-206ENST00000444475 CFAP36Q96G28 342 aa4.42□□□□□ -1.7
UBR3-206ENST00000444475 NAF1Q96HR8 494 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms