RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 MMGT1Q8N4V1 131 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 CERKQ8TCT0 537 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 ZNF219Q9P2Y4 722 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 GOLGA6CA6NDK9 693 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 PPEF1O14829 653 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 LCA5LO95447 670 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 GOLGA6DP0CG33 693 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 EEF2P13639 858 aaKnown RBP14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 NR2F2P24468 414 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 KLHL30Q0D2K2 578 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 ORC2Q13416 577 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 KCTD16Q68DU8 428 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 CCDC65Q8IXS2 484 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 CYP2W1Q8TAV3 490 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 DBNDD1Q9H9R9 158 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 GOLGA6AQ9NYA3 693 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 hCG_1984214I3L0E3 225 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 HOXA13P31271 388 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 CARSP49589 748 aaKnown RBP14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 KCNH2Q12809 1159 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 DCAF17Q5H9S7 520 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 SRLQ86TD4 932 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 ZNF713Q8N859 430 aaPredicted RBP14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 DNAJC18Q9H819 358 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 CEP72Q9P209 647 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 STIM2Q9P246 746 aa14.93□□□□□ -0.02
HERPUD1-204ENST00000439977 RSPH10B2B2RC85 870 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 FAM153BP0C7A2 387 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 RSPH10BP0C881 870 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 GUCY2FP51841 1108 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 KCNA1Q09470 495 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 FAM153CQ494X1 144 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 TCERG1LQ5VWI1 586 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 CATSPER3Q86XQ3 398 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 ANO3Q9BYT9 981 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 LRRC27Q9C0I9 530 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 FAM153AQ9UHL3 310 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 NFU1Q9UMS0 254 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 PCDHA2Q9Y5H9 948 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 SBF2Q86WG5 1849 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 VGLL3A8MV65 326 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 TULP1O00294 542 aaPredicted RBP14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 GDF11O95390 407 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 SERPING1P05155 500 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 GUCY2DQ02846 1103 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 CDC37Q16543 378 aaPredicted RBP14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 APOBEC3HQ6NTF7 200 aaKnown RBP14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 TRIM59Q8IWR1 403 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 ARL8AQ96BM9 186 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 EPB41L5Q9HCM4 733 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 PODXL2Q9NZ53 605 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 ATP6V0A2Q9Y487 856 aa14.92□□□□□ -0.02
HERPUD1-204ENST00000439977 DDTLA6NHG4 134 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 KRT14P02533 472 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 GPATCH4Q5T3I0 446 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 KLHL7Q8IXQ5 586 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 PROM2Q8N271 834 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 FAM76AQ8TAV0 307 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 KRT12Q99456 494 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 NT5C3AQ9H0P0 336 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 KCTD10Q9H3F6 313 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 CLIC2O15247 247 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 HLA-DOAP06340 250 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 MYBP10242 640 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 SEPT2Q15019 361 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 SPICE1Q8N0Z3 855 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 SH2D3CQ8N5H7 860 aa14.91□□□□□ -0.02
HERPUD1-204ENST00000439977 SSU72P8A0A1W2PR75 194 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 TOM1O60784 492 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 PTK2Q05397 1052 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 CFAP221Q4G0U5 840 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 SLFN13Q68D06 897 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 GJB7Q6PEY0 223 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 SFR1Q86XK3 245 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 IQCDQ96DY2 449 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 ATF5Q9Y2D1 282 aaPredicted RBP14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 MYH1P12882 1939 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 PJA2O43164 708 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 IVLP07476 585 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 PRLRP16471 622 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 NOP2P46087 812 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 SPAG5Q96R06 1193 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 REEP2Q9BRK0 252 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 COL24A1Q17RW2 1714 aa14.9□□□□□ -0.02
HERPUD1-204ENST00000439977 FAM86B1E9PN63 330 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 UBAP1LF5GYI3 381 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 MEIS2O14770 477 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 BTAF1O14981 1849 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 CETN3O15182 167 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 HEXIM1O94992 359 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 ABCB11O95342 1321 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 FAM86B2P0C5J1 330 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 POLD1P28340 1107 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 CASP4P49662 377 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 SLC12A3P55017 1021 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 ARHGAP4P98171 946 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 ASIC2Q16515 512 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 SLC18A3Q16572 532 aa14.89□□□□□ -0.03
HERPUD1-204ENST00000439977 TEKT1Q969V4 418 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms