RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 FCER1AP12319 257 aa20.64■□□□□ 0.89
FAM3A-212ENST00000434658 PABPC4Q13310 644 aaKnown RBP eCLIP20.64■□□□□ 0.896e-7■■■□□ 16
FAM3A-212ENST00000434658 UNC13DQ70J99 1090 aa20.64■□□□□ 0.89
FAM3A-212ENST00000434658 KIAA0895Q8NCT3 520 aa20.64■□□□□ 0.89
FAM3A-212ENST00000434658 ATRIPQ8WXE1 791 aa20.64■□□□□ 0.89
FAM3A-212ENST00000434658 LARP4BQ92615 738 aaKnown RBP20.64■□□□□ 0.89
FAM3A-212ENST00000434658 CDK5RAP3Q96JB5 506 aa20.64■□□□□ 0.89
FAM3A-212ENST00000434658 TUBGCP2Q9BSJ2 902 aa20.64■□□□□ 0.89
FAM3A-212ENST00000434658 LOC285556D6RIA3 1793 aa20.64■□□□□ 0.89
FAM3A-212ENST00000434658 MYMKA6NI61 221 aa20.63■□□□□ 0.89
FAM3A-212ENST00000434658 GCFC2P16383 781 aaKnown RBP20.63■□□□□ 0.89
FAM3A-212ENST00000434658 TUBB2AQ13885 445 aa20.63■□□□□ 0.89
FAM3A-212ENST00000434658 UBE2SQ16763 222 aa20.63■□□□□ 0.89
FAM3A-212ENST00000434658 TMEM119Q4V9L6 283 aa20.63■□□□□ 0.89
FAM3A-212ENST00000434658 RSRC2Q7L4I2 434 aaKnown RBP20.63■□□□□ 0.89
FAM3A-212ENST00000434658 RETREG2Q8NC44 543 aa20.63■□□□□ 0.89
FAM3A-212ENST00000434658 RAD54LQ92698 747 aa20.63■□□□□ 0.89
FAM3A-212ENST00000434658 CNOT6LQ96LI5 555 aaKnown RBP20.63■□□□□ 0.89
FAM3A-212ENST00000434658 PARK7Q99497 189 aaKnown RBP20.63■□□□□ 0.89
FAM3A-212ENST00000434658 TUBB2BQ9BVA1 445 aa20.63■□□□□ 0.89
FAM3A-212ENST00000434658 ARGLU1Q9NWB6 273 aaPredicted RBP20.63■□□□□ 0.89
FAM3A-212ENST00000434658 MYO1AQ9UBC5 1043 aa20.63■□□□□ 0.89
FAM3A-212ENST00000434658 LUC7L2Q9Y383 392 aaKnown RBP20.63■□□□□ 0.89
FAM3A-212ENST00000434658 TLR2O60603 784 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 OSBPP22059 807 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 CLCN6P51797 869 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 MCM6Q14566 821 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 KRT79Q5XKE5 535 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 CENPPQ6IPU0 288 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 MKL1Q969V6 931 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 NAP1L4Q99733 375 aaKnown RBP20.62■□□□□ 0.89
FAM3A-212ENST00000434658 NUP58Q9BVL2 599 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 LRRC27Q9C0I9 530 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 GLT8D2Q9H1C3 349 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 PNMA3Q9UL41 463 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 POTEMA6NI47 508 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 B4DLN1 442 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 PRKCSHP14314 528 aaPredicted RBP20.62■□□□□ 0.89
FAM3A-212ENST00000434658 SLC16A2P36021 539 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 ARHGAP25P42331 645 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 KCTD1Q719H9 257 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 SNX29Q8TEQ0 813 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 TTYH3Q9C0H2 523 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 PRDM10Q9NQV6 1147 aa20.62■□□□□ 0.89
FAM3A-212ENST00000434658 DDX25Q9UHL0 483 aaKnown RBP20.62■□□□□ 0.89
FAM3A-212ENST00000434658 PES1O00541 588 aaKnown RBP20.61■□□□□ 0.89
FAM3A-212ENST00000434658 VCAM1P19320 739 aa20.61■□□□□ 0.89
FAM3A-212ENST00000434658 KIAA1755Q5JYT7 1200 aa20.61■□□□□ 0.89
FAM3A-212ENST00000434658 ZNF569Q5MCW4 686 aa20.61■□□□□ 0.89
FAM3A-212ENST00000434658 GPR161Q8N6U8 529 aaKnown RBP20.61■□□□□ 0.89
FAM3A-212ENST00000434658 ZNF296Q8WUU4 475 aaPredicted RBP20.61■□□□□ 0.89
FAM3A-212ENST00000434658 DCAF4Q8WV16 495 aa20.61■□□□□ 0.89
FAM3A-212ENST00000434658 SEMA6BQ9H3T3 888 aa20.61■□□□□ 0.89
FAM3A-212ENST00000434658 VCPKMTQ9H867 229 aa20.61■□□□□ 0.89
FAM3A-212ENST00000434658 PSTPIP2Q9H939 334 aa20.61■□□□□ 0.89
FAM3A-212ENST00000434658 EPN1Q9Y6I3 576 aaPredicted RBP20.61■□□□□ 0.89
FAM3A-212ENST00000434658 NDUFA10O95299 355 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 MEA1Q16626 185 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 SPICE1Q8N0Z3 855 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 KRT222Q8N1A0 295 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 HAS1Q92839 578 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 CHP1Q99653 195 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 ASCC2Q9H1I8 757 aaPredicted RBP20.6■□□□□ 0.89
FAM3A-212ENST00000434658 CPA4Q9UI42 421 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 MTIF2P46199 727 aaKnown RBP20.6■□□□□ 0.89
FAM3A-212ENST00000434658 IRX3P78415 501 aaPredicted RBP20.6■□□□□ 0.89
FAM3A-212ENST00000434658 MIIPQ5JXC2 388 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 GUF1Q8N442 669 aaKnown RBP20.6■□□□□ 0.89
FAM3A-212ENST00000434658 SMCR8Q8TEV9 937 aaPredicted RBP20.6■□□□□ 0.89
FAM3A-212ENST00000434658 LPAR1Q92633 364 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 RABGGTAQ92696 567 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 GOLGA1Q92805 767 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 ERGIC2Q96RQ1 377 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 SLF1Q9BQI6 1058 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 RPAP3Q9H6T3 665 aaPredicted RBP20.6■□□□□ 0.89
FAM3A-212ENST00000434658 GOPCQ9HD26 462 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 SLC39A2Q9NP94 309 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 CDC23Q9UJX2 597 aa20.6■□□□□ 0.89
FAM3A-212ENST00000434658 CTAGE9A4FU28 777 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 USP17L15C9J2P7 530 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 USP17L13C9JLJ4 530 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 USP17L11C9JVI0 530 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 USP17L18D6R9N7 530 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 USP17L22D6RA61 530 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 USP17L17D6RBQ6 530 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 USP17L19D6RCP7 530 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 USP17L20D6RJB6 530 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 FKTNO75072 461 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 ZSCAN20P17040 1043 aaPredicted RBP20.59■□□□□ 0.89
FAM3A-212ENST00000434658 EHHADHQ08426 723 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 TBC1D8BQ0IIM8 1120 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 USP17L24Q0WX57 530 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 PSMD2Q13200 908 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 BMS1Q14692 1282 aaKnown RBP20.59■□□□□ 0.89
FAM3A-212ENST00000434658 TSR1Q2NL82 804 aaKnown RBP20.59■□□□□ 0.89
FAM3A-212ENST00000434658 FIGNQ5HY92 759 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 HYIQ5T013 277 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 WDR59Q6PJI9 974 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 FOXR2Q6PJQ5 311 aa20.59■□□□□ 0.89
FAM3A-212ENST00000434658 C17orf99Q6UX52 265 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms