RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 OLFML2BQ68BL8 750 aa17.67■□□□□ 0.42
RIF1-204ENST00000430328 EPM2AIP1Q7L775 607 aaPredicted RBP17.67■□□□□ 0.42
RIF1-204ENST00000430328 SCG3Q8WXD2 468 aaKnown RBP17.67■□□□□ 0.42
RIF1-204ENST00000430328 CALN1Q9BXU9 219 aa17.67■□□□□ 0.42
RIF1-204ENST00000430328 RIMBP2O15034 1052 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 COPS2P61201 443 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 TADA1Q96BN2 335 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 KIF2CQ99661 725 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 SLC5A4Q9NY91 659 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 CFAP73A6NFT4 308 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 DYNLT1P63172 113 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 ADALQ6DHV7 355 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 RAD23BP54727 409 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 CDH2P19022 906 aaPredicted RBP17.66■□□□□ 0.42
RIF1-204ENST00000430328 ZFP42Q96MM3 310 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 MTRF1O75570 445 aaKnown RBP17.66■□□□□ 0.42
RIF1-204ENST00000430328 PA2G4Q9UQ80 394 aaKnown RBP17.66■□□□□ 0.42
RIF1-204ENST00000430328 ENC1O14682 589 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 ASAP2O43150 1006 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 TFAP4Q01664 338 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 NSUN2Q08J23 767 aaKnown RBP eCLIP17.66■□□□□ 0.42
RIF1-204ENST00000430328 KRR1Q13601 381 aaKnown RBP17.66■□□□□ 0.42
RIF1-204ENST00000430328 CCDC127Q96BQ5 260 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 MTERF3Q96E29 417 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 MED7O43513 233 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 TSPY1Q01534 308 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 TFCP2Q12800 502 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 ARHGEF16Q5VV41 709 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 TRIM63Q969Q1 353 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 ANKRD36BP1Q96IX9 119 aa17.66■□□□□ 0.42
RIF1-204ENST00000430328 DIAPH2O60879 1101 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 KITP10721 976 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 CYTH1Q15438 398 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 FBXO18Q8NFZ0 1043 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 ULK4Q96C45 1275 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 UBAP1Q9NZ09 502 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 SEL1LQ9UBV2 794 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 PCDHB15Q9Y5E8 787 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 ADAM9Q13443 819 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 ZYXQ15942 572 aaKnown RBP17.65■□□□□ 0.42
RIF1-204ENST00000430328 KRT39Q6A163 491 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 RCSD1Q6JBY9 416 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 LSG1Q9H089 658 aaKnown RBP17.65■□□□□ 0.42
RIF1-204ENST00000430328 TMEM161AQ9NX61 479 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 ACSL3O95573 720 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 ANXA1P04083 346 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 HADHAP40939 763 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 SNAP25P60880 206 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 C8orf34Q49A92 452 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 FAM161BQ96MY7 647 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 ZNF556Q9HAH1 456 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 COL4A3BPQ9Y5P4 624 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 KRT1P04264 644 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 CNGA2Q16280 664 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 PARP9Q8IXQ6 854 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 MBD2Q9UBB5 411 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 SERTAD1Q9UHV2 236 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 FAM47CQ5HY64 1035 aa17.65■□□□□ 0.42
RIF1-204ENST00000430328 BEND6Q5SZJ8 279 aaPredicted RBP17.65■□□□□ 0.42
RIF1-204ENST00000430328 SEC24DO94855 1032 aaPredicted RBP17.64■□□□□ 0.42
RIF1-204ENST00000430328 S100A9P06702 114 aaKnown RBP17.64■□□□□ 0.42
RIF1-204ENST00000430328 SLC17A8Q8NDX2 589 aa17.64■□□□□ 0.42
RIF1-204ENST00000430328 OMA1Q96E52 524 aa17.64■□□□□ 0.42
RIF1-204ENST00000430328 LRRC8EQ6NSJ5 796 aa17.64■□□□□ 0.41
RIF1-204ENST00000430328 NCOA2Q15596 1464 aa17.64■□□□□ 0.41
RIF1-204ENST00000430328 SMARCA1P28370 1054 aa17.64■□□□□ 0.41
RIF1-204ENST00000430328 CXCR5P32302 372 aa17.64■□□□□ 0.41
RIF1-204ENST00000430328 POLGP54098 1239 aaPredicted RBP17.64■□□□□ 0.41
RIF1-204ENST00000430328 TP53BP2Q13625 1128 aa17.64■□□□□ 0.41
RIF1-204ENST00000430328 JAG2Q9Y219 1238 aa17.64■□□□□ 0.41
RIF1-204ENST00000430328 FAM149B1Q96BN6 582 aa17.64■□□□□ 0.41
RIF1-204ENST00000430328 GADD45BO75293 160 aaPredicted RBP17.64■□□□□ 0.41
RIF1-204ENST00000430328 CLK1P49759 484 aaKnown RBP17.64■□□□□ 0.41
RIF1-204ENST00000430328 DR1Q01658 176 aa17.64■□□□□ 0.41
RIF1-204ENST00000430328 NR1H3Q13133 447 aa17.64■□□□□ 0.41
RIF1-204ENST00000430328 TRIP4Q15650 581 aaPredicted RBP17.64■□□□□ 0.41
RIF1-204ENST00000430328 FHDC1Q9C0D6 1143 aaPredicted RBP17.64■□□□□ 0.41
RIF1-204ENST00000430328 C9orf84Q5VXU9 1444 aa17.64■□□□□ 0.41
RIF1-204ENST00000430328 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
RIF1-204ENST00000430328 MYO1CO00159 1063 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 EIF2S1P05198 315 aaKnown RBP17.63■□□□□ 0.41
RIF1-204ENST00000430328 SPATA1Q5VX52 437 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 NT5C1BQ96P26 610 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 MLXIPQ9HAP2 919 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 ARIH1Q9Y4X5 557 aaPredicted RBP17.63■□□□□ 0.41
RIF1-204ENST00000430328 TECP42680 631 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.63■□□□□ 0.418e-7■■■■■ 32.1
RIF1-204ENST00000430328 PCDHGB4Q9UN71 923 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 NSD2O96028 1365 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 CAPN1P07384 714 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 MYO1DO94832 1006 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 METTL23Q86XA0 190 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 M0R3G1 203 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 SH3BP5LQ7L8J4 393 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 PBXIP1Q96AQ6 731 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 PRPF18Q99633 342 aaKnown RBP17.63■□□□□ 0.41
RIF1-204ENST00000430328 RASA4BC9J798 803 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 RASA4O43374 803 aa17.63■□□□□ 0.41
RIF1-204ENST00000430328 HNRNPH2P55795 449 aaKnown RBP17.63■□□□□ 0.41
RIF1-204ENST00000430328 MAST3O60307 1309 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms