RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 IQSEC1Q6DN90 963 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 ZNF746Q6NUN9 644 aaPredicted RBP8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 METTL7BQ6UX53 244 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 USP49Q70CQ1 688 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 CABP7Q86V35 215 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 DHX37Q8IY37 1157 aaKnown RBP8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 SMAP1Q8IYB5 467 aaPredicted RBP8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 TNS4Q8IZW8 715 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 OR6J1Q8NGC5 347 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 PXYLP1Q8TE99 480 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 COPS5Q92905 334 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 LENG1Q96BZ8 264 aaPredicted RBP8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 CALML4Q96GE6 196 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 SENP7Q9BQF6 1050 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 GOLPH3LQ9H4A5 285 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 DISC1Q9NRI5 854 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 KCNH3Q9ULD8 1083 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 FAM184BQ9ULE4 1060 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 STK24Q9Y6E0 443 aa8.89□□□□□ -0.99
HMGA1P4-201ENST00000428643 MYH7BA7E2Y1 1941 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 KDM3AQ9Y4C1 1321 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 RBM47A0AV96 593 aaKnown RBP8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 POTEFA5A3E0 1075 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 EML1O00423 815 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 NKRFO15226 690 aaKnown RBP eCLIP8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 KINO60870 393 aaKnown RBP8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 IGHA2P01877 340 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 PSAPP07602 524 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 LIG1P18858 919 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 PTGS1P23219 599 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 STAT6P42226 847 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 SYKP43405 635 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 NDUFA8P51970 172 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 FAM160A1Q05DH4 1040 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 CACNB2Q08289 660 aaPredicted RBP8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 LAMC2Q13753 1193 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 PDIA5Q14554 519 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 KARSQ15046 597 aaKnown RBP8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 SLC9C1Q4G0N8 1177 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 DUSP28Q4G0W2 176 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 TMEM63BQ5T3F8 832 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 MIS18BP1Q6P0N0 1132 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 POTEGQ6S5H5 508 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 CTU1Q7Z7A3 348 aaKnown RBP8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 TLK2Q86UE8 772 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 PDILTQ8N807 584 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 BANK1Q8NDB2 785 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 TRPV1Q8NER1 839 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 RDM1Q8NG50 284 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 NEK9Q8TD19 979 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 SH3TC2Q8TF17 1288 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 DHX58Q96C10 678 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 PLIN2Q99541 437 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 EIF2AK1Q9BQI3 630 aaKnown RBP8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 BCAS3Q9H6U6 928 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 CCDC39Q9UFE4 941 aa8.88□□□□□ -0.99
HMGA1P4-201ENST00000428643 POTEB3A0JP26 581 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 POLR2DO15514 142 aaKnown RBP8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 SEPT4O43236 478 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 ADCY6O43306 1168 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 SUPT20HL2P0C7V6 817 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 RARBP10826 455 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 PLCG1P19174 1290 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 CCND3P30281 292 aaPredicted RBP8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 EPHA7Q15375 998 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 BRDTQ58F21 947 aaPredicted RBP8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 UTP14CQ5TAP6 766 aaKnown RBP8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 MAP3K21Q5TCX8 1036 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 RRAGBQ5VZM2 374 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 FAM160B1Q5W0V3 765 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 POTEBQ6S5H4 581 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 B3GNT9Q6UX72 402 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 TPH2Q8IWU9 490 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 PPTC7Q8NI37 304 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 GPT2Q8TD30 523 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 AFG1LQ8WV93 481 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 ATP6V0A1Q93050 837 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 DYDC2Q96IM9 177 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 CCDC43Q96MW1 224 aaKnown RBP8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 PYM1Q9BRP8 204 aaKnown RBP8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 LXNQ9BS40 222 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 MMTAG2Q9BU76 263 aaKnown RBP8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 PANK2Q9BZ23 570 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 CCSER1Q9C0I3 900 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 AP5M1Q9H0R1 490 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 TUFT1Q9NNX1 390 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 DDX19AQ9NUU7 478 aaKnown RBP8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 RGL1Q9NZL6 768 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 HPSEQ9Y251 543 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 PTPN22Q9Y2R2 807 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 PCDHA10Q9Y5I2 948 aa8.87□□□□□ -0.99
HMGA1P4-201ENST00000428643 A0A087X0B3 334 aa8.86□□□□□ -0.99
HMGA1P4-201ENST00000428643 FAM237AA0A1B0GTK4 181 aa8.86□□□□□ -0.99
HMGA1P4-201ENST00000428643 DYNC1LI2O43237 492 aaPredicted RBP8.86□□□□□ -0.99
HMGA1P4-201ENST00000428643 SLC26A4O43511 780 aa8.86□□□□□ -0.99
HMGA1P4-201ENST00000428643 MED24O75448 989 aa8.86□□□□□ -0.99
HMGA1P4-201ENST00000428643 NR1I2O75469 434 aa8.86□□□□□ -0.99
HMGA1P4-201ENST00000428643 MYCP01106 439 aaPredicted RBP8.86□□□□□ -0.99
HMGA1P4-201ENST00000428643 MYCNP04198 464 aaPredicted RBP8.86□□□□□ -0.99
HMGA1P4-201ENST00000428643 ZNF286BP0CG31 522 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms