RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 CCDC65Q8IXS2 484 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 IQCKQ8N0W5 287 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 TACO1Q9BSH4 297 aaKnown RBP11.2□□□□□ -0.62
CTCFL-206ENST00000426658 GDF3Q9NR23 364 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 HAUS2Q9NVX0 235 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 MINPP1Q9UNW1 487 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 BUB1BO60566 1050 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-206ENST00000426658 BIRC3Q13489 604 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 UNC13DQ70J99 1090 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 ZNF804AQ7Z570 1209 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 DAAM2Q86T65 1068 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 RPAINQ86UA6 219 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 SH3RF3Q8TEJ3 882 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-206ENST00000426658 TBC1D31Q96DN5 1066 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 CDCA7Q9BWT1 371 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-206ENST00000426658 ANKRD2Q9GZV1 360 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 SEMA6BQ9H3T3 888 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 SAMD15Q9P1V8 674 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 COL4A3BPQ9Y5P4 624 aa11.2□□□□□ -0.62
CTCFL-206ENST00000426658 CETN3O15182 167 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 KLRC1P26715 233 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 PPP2R2AP63151 447 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 FKBP3Q00688 224 aaKnown RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 TCP10Q12799 353 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 FAM26FQ5R3K3 315 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 YTHDF3Q7Z739 585 aaKnown RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 ZKSCAN4Q969J2 545 aaPredicted RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 FAM84BQ96KN1 310 aaPredicted RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 CEP72Q9P209 647 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 ZNF804BA4D1E1 1349 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 ERVV-1B6SEH8 477 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 CLGNO14967 610 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 ORC4O43929 436 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 NEBLO76041 1014 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 VIMP08670 466 aaKnown RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 PRPHP41219 470 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 PLCB4Q15147 1175 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 ARMC9Q7Z3E5 817 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 GPBP1Q86WP2 473 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 OGFOD1Q8N543 542 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 RIC8AQ9NPQ8 531 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 KIAA1024Q9UPX6 916 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 FER1L4A9Z1Z3 1794 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 RASSF10A6NK89 507 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 PGRMC1O00264 195 aaKnown RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 MEIS1O00470 390 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 MAGOHP61326 146 aaKnown RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 MAP2K1Q02750 393 aaPredicted RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 DHX9Q08211 1270 aaKnown RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 HIBCHQ6NVY1 386 aaPredicted RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 DDX42Q86XP3 938 aaKnown RBP eCLIP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 CLEC10AQ8IUN9 316 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 GUF1Q8N442 669 aaKnown RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 MAGOHBQ96A72 148 aaKnown RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 EDEM3Q9BZQ6 932 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 GOLPH3Q9H4A6 298 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 DONSONQ9NYP3 566 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 PCDHA12Q9UN75 941 aa11.19□□□□□ -0.62
CTCFL-206ENST00000426658 ATXN2Q99700 1313 aaKnown RBP11.19□□□□□ -0.62
CTCFL-206ENST00000426658 HSD17B3P37058 310 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 BTDP43251 543 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 GSCP56915 257 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-206ENST00000426658 LRIG3Q6UXM1 1119 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 HOOK3Q86VS8 718 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 C4orf32Q8N8J7 132 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 CCDC197Q8NCU1 140 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 PBKQ96KB5 322 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 RIOK1Q9BRS2 568 aaKnown RBP11.18□□□□□ -0.62
CTCFL-206ENST00000426658 DDX47Q9H0S4 455 aaKnown RBP11.18□□□□□ -0.62
CTCFL-206ENST00000426658 TMBIM4Q9HC24 238 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 PANK4Q9NVE7 773 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 FBXL5Q9UKA1 691 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 SIK3Q9Y2K2 1263 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 ATP6V0A2Q9Y487 856 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 GOLGA6L10A0A0M3HER8 536 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 GSTTP1A0A1W2PQM5 241 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 CTNND1O60716 968 aaKnown RBP11.18□□□□□ -0.62
CTCFL-206ENST00000426658 HNRNPH3P31942 346 aaKnown RBP11.18□□□□□ -0.62
CTCFL-206ENST00000426658 ARHGAP44Q17R89 818 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 MFSD14BQ5SR56 506 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 CYB5D1Q6P9G0 228 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 SEC16BQ96JE7 1060 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 TMEM47Q9BQJ4 181 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 STK17AQ9UEE5 414 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 PVALEFA0A1B0GWK0 134 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 PJA2O43164 708 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 CLTAP09496 248 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 DDR1Q08345 913 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 ADAM9Q13443 819 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 NKX1-1Q15270 411 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-206ENST00000426658 NAB2Q15742 525 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 CENPPQ6IPU0 288 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 ARHGAP27Q6ZUM4 889 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 ZNF572Q7Z3I7 529 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-206ENST00000426658 USP38Q8NB14 1042 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 U2AF1L4Q8WU68 220 aaKnown RBP11.18□□□□□ -0.62
CTCFL-206ENST00000426658 HVCN1Q96D96 273 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 NSRP1Q9H0G5 558 aaKnown RBP11.18□□□□□ -0.62
CTCFL-206ENST00000426658 ISCUQ9H1K1 167 aa11.18□□□□□ -0.62
CTCFL-206ENST00000426658 ZBTB21Q9ULJ3 1066 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms