RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 HFE2Q6ZVN8 426 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 SV2BQ7L1I2 683 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 FASTKD5Q7L8L6 764 aaKnown RBP7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 CERS3Q8IU89 383 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 TRIB2Q92519 343 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 MDFIQ99750 246 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 RASSF4Q9H2L5 321 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 CCSER2Q9H7U1 834 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 SRA1Q9HD15 236 aaKnown RBP7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 PAG1Q9NWQ8 432 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 SAP30BPQ9UHR5 308 aaKnown RBP7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 KLF15Q9UIH9 416 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 HERC5Q9UII4 1024 aaKnown RBP7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 PALD1Q9ULE6 856 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 AFG3L2Q9Y4W6 797 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 PLXNA1Q9UIW2 1896 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 AK9Q5TCS8 1911 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 ATRNL1Q5VV63 1379 aa7.42□□□□□ -1.22
NIF3L1-207ENST00000426253 H3BM21 787 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 SMNDC1O75940 238 aaKnown RBP eCLIP7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 HLA-DOAP06340 250 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 ALADP13716 330 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 CAP2P40123 477 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 EPHB4P54760 987 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 RACK1P63244 317 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 SPP2Q13103 211 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 PWP1Q13610 501 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 MOGSQ13724 837 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 RRP1BQ14684 758 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 GPAT2Q6NUI2 795 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 GADL1Q6ZQY3 521 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 CRACR2BQ8N4Y2 399 aaPredicted RBP7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 ANKRD13CQ8N6S4 541 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 GPR161Q8N6U8 529 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 HERVK_113Q902F9 699 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 TTC9Q92623 222 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 ANKS1AQ92625 1134 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 EDC3Q96F86 508 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 DRC1Q96MC2 740 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 HAUS7Q99871 368 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 CEP44Q9C0F1 390 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 CD320Q9NPF0 282 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 FRRS1LQ9P0K9 344 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 FLT1P17948 1338 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 ZNF532Q9HCE3 1301 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 RFX7Q2KHR2 1363 aa7.41□□□□□ -1.22
NIF3L1-207ENST00000426253 DOCK3Q8IZD9 2030 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 A0A0G2JLL6 359 aaPredicted RBP7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 TRIM75PA6NK02 468 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 GRXCR1A8MXD5 290 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 VSIG8P0DPA2 414 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 PDE6AP16499 860 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 CYP2B6P20813 491 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 CCND3P30281 292 aaPredicted RBP7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 ID4P47928 161 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 SPRED3Q2MJR0 410 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 PRRT2Q7Z6L0 340 aaPredicted RBP7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 TTC6Q86TZ1 520 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 CCDC84Q86UT8 332 aaPredicted RBP7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 FAM35AQ86V20 835 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 RELL1Q8IUW5 271 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 SREK1Q8WXA9 508 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 HHIPQ96QV1 700 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 CRBNQ96SW2 442 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 POP1Q99575 1024 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 RIOK1Q9BRS2 568 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 CRNKL1Q9BZJ0 848 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 AS3MTQ9HBK9 375 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 ECHDC1Q9NTX5 307 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 SLC6A14Q9UN76 642 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 COG5Q9UP83 839 aa7.4□□□□□ -1.22
NIF3L1-207ENST00000426253 FRMPD3Q5JV73 1810 aa7.4□□□□□ -1.23
NIF3L1-207ENST00000426253 DNAH12Q6ZR08 3092 aa7.4□□□□□ -1.23
NIF3L1-207ENST00000426253 TCRBV5S4A2TA0A5A2 114 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 ASNSP08243 561 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 EIF2AK2P19525 551 aaKnown RBP7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 JAG1P78504 1218 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 ATP11AP98196 1134 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 FPGSQ05932 587 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 TBC1D8BQ0IIM8 1120 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 GNL2Q13823 731 aaKnown RBP7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 TRIM60Q495X7 471 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 ZNF394Q53GI3 561 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 MAP3K21Q5TCX8 1036 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 CEP135Q66GS9 1140 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 ZSCAN25Q6NSZ9 544 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 CACTIN-AS1Q8N1I8 211 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 BSNDQ8WZ55 320 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 PLD4Q96BZ4 506 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 TINF2Q9BSI4 451 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 ADAM19Q9H013 955 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 ACBD3Q9H3P7 528 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 PDLIM7Q9NR12 457 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 SERPINB13Q9UIV8 391 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 MSRAQ9UJ68 235 aa7.39□□□□□ -1.23
NIF3L1-207ENST00000426253 C5orf42Q9H799 3197 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 MYO9BQ13459 2157 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ELOA3CA0A087WX78 387 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms