RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SDF4Q9BRK5 362 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 TMEM63CQ9P1W3 806 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 SERTAD1Q9UHV2 236 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 DIS3Q9Y2L1 958 aaKnown RBP15.11■□□□□ 0.01
PRPF39-202ENST00000424478 FARP2O94887 1054 aaPredicted RBP15.11■□□□□ 0.01
PRPF39-202ENST00000424478 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
PRPF39-202ENST00000424478 PLCG1P19174 1290 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 LONP1P36776 959 aaKnown RBP15.11■□□□□ 0.01
PRPF39-202ENST00000424478 CCDC73Q6ZRK6 1079 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 NIPA1Q7RTP0 329 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 MIER3Q7Z3K6 550 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 ZNF467Q7Z7K2 595 aaPredicted RBP15.11■□□□□ 0.01
PRPF39-202ENST00000424478 CATSPER3Q86XQ3 398 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 MPHOSPH6Q99547 160 aaKnown RBP15.11■□□□□ 0.01
PRPF39-202ENST00000424478 ABHD16BQ9H3Z7 469 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 SLC9A2Q9UBY0 812 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 E9PMD0 336 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 TBX3O15119 743 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 SYKP43405 635 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 ACTR2P61160 394 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 GRB10Q13322 594 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 UTP14CQ5TAP6 766 aaKnown RBP15.1■□□□□ 0.01
PRPF39-202ENST00000424478 TEX2Q8IWB9 1127 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 DHX37Q8IY37 1157 aaKnown RBP15.1■□□□□ 0.01
PRPF39-202ENST00000424478 FMR1NBQ8N0W7 255 aaPredicted RBP15.1■□□□□ 0.01
PRPF39-202ENST00000424478 SCFD2Q8WU76 684 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 DISC1Q9NRI5 854 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 TCEAL9Q9UHQ7 104 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 KIAA1024Q9UPX6 916 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 ZNF202O95125 648 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 SPATA31C1P0DKV0 1188 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 MARK3P27448 753 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 AFMP43652 599 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 BEX3Q00994 111 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 RAD51AP2Q09MP3 1159 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 TTLL4Q14679 1199 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 ENGASEQ8NFI3 743 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 DDX19AQ9NUU7 478 aaKnown RBP15.1■□□□□ 0.01
PRPF39-202ENST00000424478 SYNGAP1Q96PV0 1343 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 A0A1W2PQ27 194 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 A0A1W2PQ64 194 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 A0A1W2PQD8 194 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 B4DLN1 442 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 DYNC1LI2O43237 492 aaPredicted RBP15.1■□□□□ 0.01
PRPF39-202ENST00000424478 ORC2Q13416 577 aaPredicted RBP15.1■□□□□ 0.01
PRPF39-202ENST00000424478 SWSAP1Q6NVH7 229 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 CCDC60Q8IWA6 550 aaPredicted RBP15.1■□□□□ 0.01
PRPF39-202ENST00000424478 AFG1LQ8WV93 481 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 SPATA33Q96N06 139 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 HPSEQ9Y251 543 aa15.1■□□□□ 0.01
PRPF39-202ENST00000424478 SSBP05455 408 aaKnown RBP eCLIP15.09■□□□□ 0.01
PRPF39-202ENST00000424478 HSPA8P11142 646 aaKnown RBP15.09■□□□□ 0.01
PRPF39-202ENST00000424478 ICAM3P32942 547 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 TNFAIP2Q03169 654 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 NAALADL2Q58DX5 795 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 CKAP2LQ8IYA6 745 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 RIT2Q99578 217 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 VTA1Q9NP79 307 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 FAM13BQ9NYF5 915 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 STAM2O75886 525 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 PPP2R5CQ13362 524 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 KRT79Q5XKE5 535 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 B3GNT9Q6UX72 402 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 TBC1D22BQ9NU19 505 aa15.09■□□□□ 0.01
PRPF39-202ENST00000424478 WDR81Q562E7 1941 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 MYADML2A6NDP7 307 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 BACH1O14867 736 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 SLITRK3O94933 977 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 PGK1P00558 417 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 PRR29P0C7W0 189 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 ZNF286BP0CG31 522 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 FAM160A1Q05DH4 1040 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 ARHGAP1Q07960 439 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 CELF3Q5SZQ8 465 aaKnown RBP15.08■□□□□ 0.01
PRPF39-202ENST00000424478 ISM2Q6H9L7 571 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 ZNF579Q8NAF0 562 aaKnown RBP15.08■□□□□ 0.01
PRPF39-202ENST00000424478 ZBTB10Q96DT7 871 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 LXNQ9BS40 222 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 BLZF1Q9H2G9 400 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 GABBR1Q9UBS5 961 aa15.08■□□□□ 0.01
PRPF39-202ENST00000424478 GSTTP1A0A1W2PQM5 241 aa15.08■□□□□ 0
PRPF39-202ENST00000424478 XRCC5P13010 732 aaKnown RBP15.08■□□□□ 0
PRPF39-202ENST00000424478 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
PRPF39-202ENST00000424478 CDHR1Q96JP9 859 aa15.08■□□□□ 0
PRPF39-202ENST00000424478 NOP56O00567 594 aaKnown RBP15.08■□□□□ 0
PRPF39-202ENST00000424478 INHAP05111 366 aa15.08■□□□□ 0
PRPF39-202ENST00000424478 TCF7P36402 384 aaPredicted RBP15.08■□□□□ 0
PRPF39-202ENST00000424478 STAT6P42226 847 aa15.08■□□□□ 0
PRPF39-202ENST00000424478 PDIA5Q14554 519 aa15.08■□□□□ 0
PRPF39-202ENST00000424478 PLA2G4FQ68DD2 849 aa15.08■□□□□ 0
PRPF39-202ENST00000424478 CDK5RAP3Q96JB5 506 aa15.08■□□□□ 0
PRPF39-202ENST00000424478 MTRQ99707 1265 aa15.08■□□□□ 0
PRPF39-202ENST00000424478 RAB34Q9BZG1 259 aa15.08■□□□□ 0
PRPF39-202ENST00000424478 IGHA2P01877 340 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 CYBAP13498 195 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 HOXD10P28358 340 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 MCM6Q14566 821 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 RRAGBQ5VZM2 374 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 MFSD14CQ5VZR4 134 aa15.07■□□□□ 0
PRPF39-202ENST00000424478 OR6J1Q8NGC5 347 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms