RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 NEK9Q8TD19 979 aa17.92■□□□□ 0.46
ABCA1-203ENST00000423487 GPT2Q8TD30 523 aa17.92■□□□□ 0.46
ABCA1-203ENST00000423487 CDK5RAP3Q96JB5 506 aa17.92■□□□□ 0.46
ABCA1-203ENST00000423487 MMTAG2Q9BU76 263 aaKnown RBP17.92■□□□□ 0.46
ABCA1-203ENST00000423487 FAM184BQ9ULE4 1060 aa17.92■□□□□ 0.46
ABCA1-203ENST00000423487 KDM3AQ9Y4C1 1321 aa17.92■□□□□ 0.46
ABCA1-203ENST00000423487 CCNE2O96020 404 aa17.91■□□□□ 0.46
ABCA1-203ENST00000423487 GH1P01241 217 aa17.91■□□□□ 0.46
ABCA1-203ENST00000423487 ELNP15502 786 aa17.91■□□□□ 0.46
ABCA1-203ENST00000423487 CCT6AP40227 531 aaKnown RBP17.91■□□□□ 0.46
ABCA1-203ENST00000423487 TNFAIP2Q03169 654 aa17.91■□□□□ 0.46
ABCA1-203ENST00000423487 LAMC2Q13753 1193 aa17.91■□□□□ 0.46
ABCA1-203ENST00000423487 EIF2AK1Q9BQI3 630 aaKnown RBP17.91■□□□□ 0.46
ABCA1-203ENST00000423487 BCAS3Q9H6U6 928 aa17.91■□□□□ 0.46
ABCA1-203ENST00000423487 PCDHA10Q9Y5I2 948 aa17.91■□□□□ 0.46
ABCA1-203ENST00000423487 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.9■□□□□ 0.46
ABCA1-203ENST00000423487 SORBS3O60504 671 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 HSPA8P11142 646 aaKnown RBP17.9■□□□□ 0.46
ABCA1-203ENST00000423487 CYBAP13498 195 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 SMPD1P17405 629 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 RPA1P27694 616 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 ACTR2P61160 394 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 SP4Q02446 784 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 KARSQ15046 597 aaKnown RBP17.9■□□□□ 0.46
ABCA1-203ENST00000423487 ZRSR1Q15695 479 aaKnown RBP17.9■□□□□ 0.46
ABCA1-203ENST00000423487 KLHL40Q2TBA0 621 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 MIS18BP1Q6P0N0 1132 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 FMR1NBQ8N0W7 255 aaPredicted RBP17.9■□□□□ 0.46
ABCA1-203ENST00000423487 PDILTQ8N807 584 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 ENGASEQ8NFI3 743 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 HSD17B14Q9BPX1 270 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 POLR3CQ9BUI4 534 aaPredicted RBP17.9■□□□□ 0.46
ABCA1-203ENST00000423487 PANK2Q9BZ23 570 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 NT5C3AQ9H0P0 336 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 TUFT1Q9NNX1 390 aa17.9■□□□□ 0.46
ABCA1-203ENST00000423487 NOP56O00567 594 aaKnown RBP17.89■□□□□ 0.45
ABCA1-203ENST00000423487 FOXN1O15353 648 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 POLR2DO15514 142 aaKnown RBP17.89■□□□□ 0.45
ABCA1-203ENST00000423487 TRAK2O60296 914 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 NR1I2O75469 434 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 ZNF202O95125 648 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 P4HBP07237 508 aaKnown RBP17.89■□□□□ 0.45
ABCA1-203ENST00000423487 PSAPP07602 524 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 AKR1A1P14550 325 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 MUTP22033 750 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 CTCFP49711 727 aaPredicted RBP17.89■□□□□ 0.45
ABCA1-203ENST00000423487 CACNB2Q08289 660 aaPredicted RBP17.89■□□□□ 0.45
ABCA1-203ENST00000423487 SNW1Q13573 536 aaKnown RBP17.89■□□□□ 0.45
ABCA1-203ENST00000423487 HYIQ5T013 277 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 RRAGBQ5VZM2 374 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 KCTD17Q8N5Z5 321 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 IQUBQ8NA54 791 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 SEPT1Q8WYJ6 367 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 COPS5Q92905 334 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 EMID1Q96A84 441 aaPredicted RBP17.89■□□□□ 0.45
ABCA1-203ENST00000423487 SPATA33Q96N06 139 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 DACT1Q9NYF0 836 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 USP25Q9UHP3 1055 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 PTCH2Q9Y6C5 1203 aa17.89■□□□□ 0.45
ABCA1-203ENST00000423487 KINO60870 393 aaKnown RBP17.88■□□□□ 0.45
ABCA1-203ENST00000423487 MED24O75448 989 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 ATG7O95352 703 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 HSPA1AP0DMV8 641 aaKnown RBP17.88■□□□□ 0.45
ABCA1-203ENST00000423487 HSPA1BP0DMV9 641 aaKnown RBP17.88■□□□□ 0.45
ABCA1-203ENST00000423487 PRKAR2AP13861 404 aaKnown RBP17.88■□□□□ 0.45
ABCA1-203ENST00000423487 GRK4P32298 578 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 ARHGAP1Q07960 439 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 TMEM63BQ5T3F8 832 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 ABHD15Q6UXT9 468 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 CATSPER3Q86XQ3 398 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 TRPV1Q8NER1 839 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 DYDC2Q96IM9 177 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 DDX19AQ9NUU7 478 aaKnown RBP17.88■□□□□ 0.45
ABCA1-203ENST00000423487 PTPN22Q9Y2R2 807 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 Q9Y3F1 56 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 A0A087X0B3 334 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 DKC1O60832 514 aaKnown RBP eCLIP17.88■□□□□ 0.456e-6■■■□□ 15
ABCA1-203ENST00000423487 SLITRK3O94933 977 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 SUPT20HL2P0C7V6 817 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 SPATA31C1P0DKV0 1188 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 STAT6P42226 847 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 CYP4A11Q02928 519 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 TRIM32Q13049 653 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 GRB10Q13322 594 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 TMEM119Q4V9L6 283 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 TPH2Q8IWU9 490 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 DHX58Q96C10 678 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 CCDC34Q96HJ3 373 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 TIGD1Q96MW7 591 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 PNMA5Q96PV4 448 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 GPR20Q99678 358 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 RGL1Q9NZL6 768 aa17.88■□□□□ 0.45
ABCA1-203ENST00000423487 GNEQ9Y223 722 aaKnown RBP17.88■□□□□ 0.45
ABCA1-203ENST00000423487 GSTTP1A0A1W2PQM5 241 aa17.87■□□□□ 0.45
ABCA1-203ENST00000423487 POTEB3A0JP26 581 aa17.87■□□□□ 0.45
ABCA1-203ENST00000423487 SEPT4O43236 478 aa17.87■□□□□ 0.45
ABCA1-203ENST00000423487 PLCG1P19174 1290 aa17.87■□□□□ 0.45
ABCA1-203ENST00000423487 CNGA1P29973 690 aa17.87■□□□□ 0.45
ABCA1-203ENST00000423487 QARSP47897 775 aaKnown RBP17.87■□□□□ 0.45
ABCA1-203ENST00000423487 PSMC5P62195 406 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms