RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 FCER1AP12319 257 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 FAM114A1Q8IWE2 563 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 P3H4Q92791 437 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 PSMD1Q99460 953 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 PYM1Q9BRP8 204 aaKnown RBP16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 GOPCQ9HD26 462 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 DISC1Q9NRI5 854 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 NFS1Q9Y697 457 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 MROH5Q6ZUA9 1318 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 DAPK3O43293 454 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 MMEP08473 750 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 ASIC1P78348 528 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 CDK17Q00537 523 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 UBE3CQ15386 1083 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 CCDC155Q8N6L0 562 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 UIMC1Q96RL1 719 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 CCDC113Q9H0I3 377 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 ISCUQ9H1K1 167 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 SAMD15Q9P1V8 674 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 TSKSQ9UJT2 592 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 WNK3Q9BYP7 1800 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 EVI5O60447 810 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 KLRC1P26715 233 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 DHX9Q08211 1270 aaKnown RBP16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 MAP3K12Q12852 859 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 STK4Q13043 487 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 C1orf131Q8NDD1 294 aaKnown RBP16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 ABCF3Q9NUQ8 709 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 RNF14Q9UBS8 474 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 FBXO3Q9UK99 471 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 ATP8A1Q9Y2Q0 1164 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 RPS6KA4O75676 772 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 ICA1Q05084 483 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 ERICH1Q86X53 443 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 USP38Q8NB14 1042 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 RASGRP4Q8TDF6 673 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 AGAP1Q9UPQ3 857 aa16.09■□□□□ 0.17
NCKIPSD-204ENST00000416649 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.08■□□□□ 0.17
NCKIPSD-204ENST00000416649 CAND2O75155 1236 aa16.08■□□□□ 0.17
NCKIPSD-204ENST00000416649 CHN1P15882 459 aa16.08■□□□□ 0.17
NCKIPSD-204ENST00000416649 CCNE1P24864 410 aa16.08■□□□□ 0.17
NCKIPSD-204ENST00000416649 ALDH5A1P51649 535 aaPredicted RBP16.08■□□□□ 0.17
NCKIPSD-204ENST00000416649 CRELD2Q6UXH1 353 aaPredicted RBP16.08■□□□□ 0.17
NCKIPSD-204ENST00000416649 LRRC34Q8IZ02 419 aa16.08■□□□□ 0.17
NCKIPSD-204ENST00000416649 TMTC2Q8N394 836 aa16.08■□□□□ 0.17
NCKIPSD-204ENST00000416649 GIMAP8Q8ND71 665 aaPredicted RBP16.08■□□□□ 0.17
NCKIPSD-204ENST00000416649 ERGIC2Q96RQ1 377 aa16.08■□□□□ 0.17
NCKIPSD-204ENST00000416649 NDST4Q9H3R1 872 aa16.08■□□□□ 0.17
NCKIPSD-204ENST00000416649 SPATA31A6Q5VVP1 1343 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 FGFR2P21802 821 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 NAALADL2Q58DX5 795 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 TRAPPC3LQ5T215 181 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 A0A1W2PQJ5 194 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 BICDL2A1A5D9 508 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 GSG1L2A8MUP6 293 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 KLRC4O43908 158 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 PECAM1P16284 738 aaPredicted RBP16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 SSR1P43307 286 aaKnown RBP16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 KIAA0753Q2KHM9 967 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 TRPM8Q7Z2W7 1104 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 UHMK1Q8TAS1 419 aaKnown RBP16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 INPP4AQ96PE3 977 aaPredicted RBP16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 NACAP1Q9BZK3 213 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 AMACRQ9UHK6 382 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 NARFQ9UHQ1 456 aa16.08■□□□□ 0.16
NCKIPSD-204ENST00000416649 NMT2O60551 498 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 UBOX5O94941 541 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 ECHS1P30084 290 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 TAX1BP1Q86VP1 789 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 DNAAF5Q86Y56 855 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 STAG2Q8N3U4 1231 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 LCORLQ8N3X6 602 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 CCHCR1Q8TD31 782 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 DHTKD1Q96HY7 919 aaPredicted RBP16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 L3MBTL3Q96JM7 780 aaPredicted RBP16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 PACSIN1Q9BY11 444 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 TRPC5Q9UL62 973 aaPredicted RBP16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 MYH3P11055 1940 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 IGF2BP3O00425 579 aaKnown RBP eCLIP16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 SART1O43290 800 aaKnown RBP16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 SMIM24O75264 130 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 PSMD2Q13200 908 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 TAF11Q15544 211 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 VWA3BQ502W6 1294 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 OSBPL1AQ9BXW6 950 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 MINPP1Q9UNW1 487 aa16.07■□□□□ 0.16
NCKIPSD-204ENST00000416649 RHOBTB3O94955 611 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 ERMARDQ5T6L9 678 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 AGBL2Q5U5Z8 902 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 CLEC4GQ6UXB4 293 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 DTHD1Q6ZMT9 781 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 TBC1D5Q92609 795 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 KLHL29Q96CT2 875 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 FAM129AQ9BZQ8 928 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 MTFR1LQ9H019 292 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 SLC12A4Q9UP95 1085 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 NQO1P15559 274 aaKnown RBP16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 CUL1Q13616 776 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 RPS6KA1Q15418 735 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms