RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 CASP7P55210 303 aa5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 FANCCQ00597 558 aa5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 SKIDA1Q1XH10 827 aa5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 DPP8Q6V1X1 898 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 NLRP10Q86W26 655 aa5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 PPIL6Q8IXY8 311 aa5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 TTLL11Q8NHH1 800 aa5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 PARPBPQ9NWS1 579 aa5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 HSPBP1Q9NZL4 362 aa5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 NR2E1Q9Y466 385 aa5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 TNFRSF18Q9Y5U5 241 aa5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 TMEM191CA6NGB0 347 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 CYP27B1O15528 508 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 CUTAO60888 179 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 KNG1P01042 644 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 CKMP06732 381 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 ZC3H6P61129 1189 aaKnown RBP5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 PAK2Q13177 524 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 PHF19Q5T6S3 580 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 ACBD5Q5T8D3 534 aaPredicted RBP5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 STPG3Q8N7X2 389 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 BACH2Q9BYV9 841 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 GZF1Q9H116 711 aaPredicted RBP5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 MSL2Q9HCI7 577 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 ASH2LQ9UBL3 628 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 DMRT1Q9Y5R6 373 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 SLC30A1Q9Y6M5 507 aa5.1□□□□□ -1.59
TRAPPC13-203ENST00000415825 ITGAVP06756 1048 aa5.09□□□□□ -1.59
TRAPPC13-203ENST00000415825 COL6A1P12109 1028 aa5.09□□□□□ -1.59
TRAPPC13-203ENST00000415825 SGMS1Q86VZ5 419 aa5.09□□□□□ -1.59
TRAPPC13-203ENST00000415825 SCUBE1Q8IWY4 988 aa5.09□□□□□ -1.59
TRAPPC13-203ENST00000415825 CACTINQ8WUQ7 758 aaKnown RBP5.09□□□□□ -1.59
TRAPPC13-203ENST00000415825 GPRASP2Q96D09 838 aa5.09□□□□□ -1.59
TRAPPC13-203ENST00000415825 SCYL1Q96KG9 808 aa5.09□□□□□ -1.59
TRAPPC13-203ENST00000415825 KATNBL1Q9H079 304 aa5.09□□□□□ -1.59
TRAPPC13-203ENST00000415825 PUF60Q9UHX1 559 aaKnown RBP5.09□□□□□ -1.59
TRAPPC13-203ENST00000415825 U2SURPO15042 1029 aaKnown RBP5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 GRIN1Q05586 938 aa5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 CRHR2Q13324 411 aa5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 LDLRAD3Q86YD5 345 aa5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 ZNF513Q8N8E2 541 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 RCBTB1Q8NDN9 531 aa5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 BTN2A2Q8WVV5 523 aa5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 VOPP1Q96AW1 172 aa5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 CLIP3Q96DZ5 547 aa5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 SLC6A20Q9NP91 592 aa5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 RBPJLQ9UBG7 517 aa5.08□□□□□ -1.6
TRAPPC13-203ENST00000415825 BMP5P22003 454 aa5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 POLD1P28340 1107 aa5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 RRADP55042 308 aa5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 SV2CQ496J9 727 aa5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 LDLRAD1Q5T700 205 aa5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 MAMDC4Q6UXC1 1216 aa5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 THEMISQ8N1K5 641 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 IL17DQ8TAD2 202 aa5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 LARP4BQ92615 738 aaKnown RBP5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 DPYSL5Q9BPU6 564 aa5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 STRIP2Q9ULQ0 834 aa5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 GIT1Q9Y2X7 761 aa5.07□□□□□ -1.6
TRAPPC13-203ENST00000415825 SCAMP3O14828 347 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 SLC27A2O14975 620 aa5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 ZNF888P0CJ79 500 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 FAHP16930 419 aa5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 RACK1P63244 317 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 MRPS21P82921 87 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 SPIRE1Q08AE8 756 aa5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 PAN2Q504Q3 1202 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 CCDC103Q8IW40 242 aa5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 WDR48Q8TAF3 677 aa5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 RASGRP4Q8TDF6 673 aa5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 MRGPRX3Q96LB0 322 aa5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 TTPALQ9BTX7 342 aa5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 PLA2G12BQ9BX93 195 aa5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 TLR9Q9NR96 1032 aa5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 KCND1Q9NSA2 647 aa5.06□□□□□ -1.6
TRAPPC13-203ENST00000415825 ESYT3A0FGR9 886 aa5.05□□□□□ -1.6
TRAPPC13-203ENST00000415825 SCG5P05408 212 aa5.05□□□□□ -1.6
TRAPPC13-203ENST00000415825 ZNF16P17020 682 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC13-203ENST00000415825 PFKPQ01813 784 aa5.05□□□□□ -1.6
TRAPPC13-203ENST00000415825 TESK1Q15569 626 aa5.05□□□□□ -1.6
TRAPPC13-203ENST00000415825 ZNF808Q8N4W9 903 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC13-203ENST00000415825 SHDQ96IW2 340 aa5.05□□□□□ -1.6
TRAPPC13-203ENST00000415825 SEC16BQ96JE7 1060 aa5.05□□□□□ -1.6
TRAPPC13-203ENST00000415825 TACO1Q9BSH4 297 aaKnown RBP5.05□□□□□ -1.6
TRAPPC13-203ENST00000415825 AGRPO00253 132 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 RHOBTB3O94955 611 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 GNAT1P11488 350 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 MSX2P35548 267 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 NASPP49321 788 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 FSTL1Q12841 308 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 TUSC3Q13454 348 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 RNF151Q2KHN1 245 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 WDR72Q3MJ13 1102 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 ZNF662Q6ZS27 426 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 Q6ZSN1 163 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 PIP4K2CQ8TBX8 421 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 MICAL1Q8TDZ2 1067 aa5.04□□□□□ -1.6
TRAPPC13-203ENST00000415825 AGAP2Q99490 1192 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms