RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 LTBP3Q9NS15 1303 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 KDM3AQ9Y4C1 1321 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 PVALEFA0A1B0GWK0 134 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 LRRC10BA6NIK2 292 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 PIK3CDO00329 1044 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 MEIS1O00470 390 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 MSH4O15457 936 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 MAP3K7O43318 606 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 CTNND1O60716 968 aaKnown RBP4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 PLA2G6O60733 806 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 MED24O75448 989 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 PLA2G4BP0C869 781 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 CIITAP33076 1130 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 CYP4A11Q02928 519 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 UBXN1Q04323 297 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 RBL2Q08999 1139 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 SPP2Q13103 211 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 SEMA3FQ13275 785 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 PRKG1Q13976 671 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 LRRC41Q15345 812 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 CEP135Q66GS9 1140 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 TTI2Q6NXR4 508 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 PRPF38AQ8NAV1 312 aaKnown RBP4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 CCDC112Q8NEF3 446 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 ZKSCAN4Q969J2 545 aaPredicted RBP4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 ZFRQ96KR1 1074 aaKnown RBP4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 FAM20AQ96MK3 541 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 BAG1Q99933 345 aaPredicted RBP4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 LRRC27Q9C0I9 530 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 ZHX3Q9H4I2 956 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 HOMER2Q9NSB8 354 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 TBC1D7Q9P0N9 293 aa4.44□□□□□ -1.7
LRRTM4-201ENST00000409088 SMCHD1A6NHR9 2005 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 MYH7BA7E2Y1 1941 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 NPHP3-ACAD11A0A0J9YXS1 232 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 BICDL2A1A5D9 508 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 AKR1B15C9JRZ8 316 aaPredicted RBP4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 TBX3O15119 743 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 WDR46O15213 610 aaKnown RBP4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 CHMP2AO43633 222 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 FLOT1O75955 427 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 KRT18P05783 430 aaKnown RBP4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 CYP3A4P08684 503 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 ALAS1P13196 640 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 PSMC6P62333 389 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 MTMR2Q13614 643 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 HAUS3Q68CZ6 603 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 GPBP1Q86WP2 473 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 CATSPER3Q86XQ3 398 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 GLIS3Q8NEA6 775 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 ERMNQ8TAM6 284 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 TRPM4Q8TD43 1214 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 ZNF526Q8TF50 670 aaPredicted RBP4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 HOOK2Q96ED9 719 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 PRIMPOLQ96LW4 560 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 WRNIP1Q96S55 665 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 DUSP9Q99956 384 aaKnown RBP4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 SLF1Q9BQI6 1058 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 KIAA1683Q9H0B3 1180 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 TMX1Q9H3N1 280 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 CDHR5Q9HBB8 845 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 RAVER2Q9HCJ3 691 aaKnown RBP4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 CTDP1Q9Y5B0 961 aaPredicted RBP4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 KIF13BQ9NQT8 1826 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 TPM2P07951 284 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 TPM1P09493 284 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 CASP14P31944 242 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 PBX1P40424 430 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 EPS15P42566 896 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 MTIF2P46199 727 aaKnown RBP4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 TERF1P54274 439 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 SPIRE1Q08AE8 756 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 PABPC4Q13310 644 aaKnown RBP eCLIP4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 HYIQ5T013 277 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 DCAF15Q66K64 600 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 LPAR1Q92633 364 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 DNAJC19Q96DA6 116 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 PPP1R13BQ96KQ4 1090 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 PCMTD1Q96MG8 357 aaPredicted RBP4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 WDR18Q9BV38 432 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 GTPBP4Q9BZE4 634 aaKnown RBP4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 SEMA6BQ9H3T3 888 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 THAP9Q9H5L6 903 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 POLD4Q9HCU8 107 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 PANK4Q9NVE7 773 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 RGL1Q9NZL6 768 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 DNM3Q9UQ16 869 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 ABCB11O95342 1321 aa4.43□□□□□ -1.7
LRRTM4-201ENST00000409088 IGLV3-22A0A075B6J6 115 aa4.42□□□□□ -1.7
LRRTM4-201ENST00000409088 EML1O00423 815 aa4.42□□□□□ -1.7
LRRTM4-201ENST00000409088 NFIBO00712 420 aa4.42□□□□□ -1.7
LRRTM4-201ENST00000409088 ARHGAP6O43182 974 aa4.42□□□□□ -1.7
LRRTM4-201ENST00000409088 STX10O60499 249 aa4.42□□□□□ -1.7
LRRTM4-201ENST00000409088 ICAM1P05362 532 aa4.42□□□□□ -1.7
LRRTM4-201ENST00000409088 ERCC3P19447 782 aa4.42□□□□□ -1.7
LRRTM4-201ENST00000409088 EEF1GP26641 437 aaKnown RBP4.42□□□□□ -1.7
LRRTM4-201ENST00000409088 RPA1P27694 616 aa4.42□□□□□ -1.7
LRRTM4-201ENST00000409088 PPP1R2P41236 205 aa4.42□□□□□ -1.7
LRRTM4-201ENST00000409088 COASYQ13057 564 aa4.42□□□□□ -1.7
LRRTM4-201ENST00000409088 FER1L6Q2WGJ9 1857 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms