RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 CCDC170Q8IYT3 715 aa18.37■□□□□ 0.53
PIKFYVE-204ENST00000407449 KIAA1683Q9H0B3 1180 aa18.37■□□□□ 0.53
PIKFYVE-204ENST00000407449 ZHX3Q9H4I2 956 aa18.37■□□□□ 0.53
PIKFYVE-204ENST00000407449 CCPG1Q9ULG6 757 aa18.37■□□□□ 0.53
PIKFYVE-204ENST00000407449 DOCK1Q14185 1865 aa18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 EFCAB8A8MWE9 144 aa18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 MUTP22033 750 aa18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 HNRNPH3P31942 346 aaKnown RBP18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 PRELPP51888 382 aa18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 KRT83P78385 493 aa18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 ERCC6LQ2NKX8 1250 aa18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 SAMD1Q6SPF0 538 aaPredicted RBP18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 PRPF38AQ8NAV1 312 aaKnown RBP18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 HSD17B14Q9BPX1 270 aa18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 WDR11Q9BZH6 1224 aa18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 LOXHD1Q8IVV2 1947 aa18.36■□□□□ 0.53
PIKFYVE-204ENST00000407449 ZNF536O15090 1300 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 PPP2R3AQ06190 1150 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 TUBB2AQ13885 445 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 ZNF662Q6ZS27 426 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 EPM2AIP1Q7L775 607 aaPredicted RBP18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 SFR1Q86XK3 245 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 TUBB2BQ9BVA1 445 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 EDEM3Q9BZQ6 932 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 BHMT2Q9H2M3 363 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 HAUS4Q9H6D7 363 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 EIF3CLB5ME19 914 aaKnown RBP18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 CTNND1O60716 968 aaKnown RBP18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 GAS7O60861 476 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 TBCAO75347 108 aaKnown RBP18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 EGFRP00533 1210 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 HERVK_113P62684 666 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 UBXN2AP68543 259 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 GHRHRQ02643 423 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 SLC35F6Q8N357 371 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 UBXN4Q92575 508 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 AGBL1Q96MI9 1066 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 EIF3CQ99613 913 aaKnown RBP18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 RGL1Q9NZL6 768 aa18.35■□□□□ 0.53
PIKFYVE-204ENST00000407449 RPTORQ8N122 1335 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 CTAGE9A4FU28 777 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 GMPSP49915 693 aaPredicted RBP18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 ARHGAP27Q6ZUM4 889 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 KRT26Q7Z3Y9 468 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 TRIM59Q8IWR1 403 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 MICALL2Q8IY33 904 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 HOOK2Q96ED9 719 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 DYDC2Q96IM9 177 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 RUSC1Q9BVN2 902 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 TANGO6Q9C0B7 1094 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 MMRN2Q9H8L6 949 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 NHEJ1Q9H9Q4 299 aaPredicted RBP18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 PLAGL2Q9UPG8 496 aa18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 SCAF8Q9UPN6 1271 aaKnown RBP18.34■□□□□ 0.53
PIKFYVE-204ENST00000407449 IPO7O95373 1038 aaKnown RBP18.33■□□□□ 0.53
PIKFYVE-204ENST00000407449 GAP43P17677 238 aa18.33■□□□□ 0.53
PIKFYVE-204ENST00000407449 CTTNQ14247 550 aaKnown RBP18.33■□□□□ 0.53
PIKFYVE-204ENST00000407449 BMT2Q1RMZ1 405 aa18.33■□□□□ 0.53
PIKFYVE-204ENST00000407449 MCF2L2Q86YR7 1114 aa18.33■□□□□ 0.53
PIKFYVE-204ENST00000407449 NEK11Q8NG66 645 aa18.33■□□□□ 0.53
PIKFYVE-204ENST00000407449 ZNF577Q9BSK1 485 aa18.33■□□□□ 0.53
PIKFYVE-204ENST00000407449 TEKT3Q9BXF9 490 aa18.33■□□□□ 0.53
PIKFYVE-204ENST00000407449 FAM207AQ9NSI2 230 aaPredicted RBP18.33■□□□□ 0.53
PIKFYVE-204ENST00000407449 FAM184BQ9ULE4 1060 aa18.33■□□□□ 0.53
PIKFYVE-204ENST00000407449 TRAF3IP3Q9Y228 551 aa18.33■□□□□ 0.53
PIKFYVE-204ENST00000407449 CETN3O15182 167 aa18.33■□□□□ 0.52
PIKFYVE-204ENST00000407449 CHMP2AO43633 222 aa18.33■□□□□ 0.52
PIKFYVE-204ENST00000407449 SLITRK3O94933 977 aa18.33■□□□□ 0.52
PIKFYVE-204ENST00000407449 CASP5P51878 434 aa18.33■□□□□ 0.52
PIKFYVE-204ENST00000407449 FBXO38Q6PIJ6 1188 aa18.33■□□□□ 0.52
PIKFYVE-204ENST00000407449 CCDC125Q86Z20 511 aa18.33■□□□□ 0.52
PIKFYVE-204ENST00000407449 CLEC4DQ8WXI8 215 aa18.33■□□□□ 0.52
PIKFYVE-204ENST00000407449 NAPGQ99747 312 aaPredicted RBP18.33■□□□□ 0.52
PIKFYVE-204ENST00000407449 MXRA8Q9BRK3 442 aa18.33■□□□□ 0.52
PIKFYVE-204ENST00000407449 EPHB6O15197 1021 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 CALUO43852 315 aaPredicted RBP18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 ABL1P00519 1130 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 ARP10275 920 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 BCRP11274 1271 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 ADAM9Q13443 819 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 EPHA7Q15375 998 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 KNOP1Q1ED39 458 aaKnown RBP18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 RINT1Q6NUQ1 792 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 B3GNT9Q6UX72 402 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 NIPA1Q7RTP0 329 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 TPH2Q8IWU9 490 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 SAMD3Q8N6K7 520 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 RIT2Q99578 217 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 SLC38A10Q9HBR0 1119 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 OLFML3Q9NRN5 406 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 HACL1Q9UJ83 578 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 CDC23Q9UJX2 597 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 PARP14Q460N5 1801 aa18.32■□□□□ 0.52
PIKFYVE-204ENST00000407449 RSPH10B2B2RC85 870 aa18.31■□□□□ 0.52
PIKFYVE-204ENST00000407449 PDXKO00764 312 aa18.31■□□□□ 0.52
PIKFYVE-204ENST00000407449 RSPH10BP0C881 870 aa18.31■□□□□ 0.52
PIKFYVE-204ENST00000407449 H2AFXP16104 143 aaPredicted RBP18.31■□□□□ 0.52
PIKFYVE-204ENST00000407449 KIAA1328Q86T90 577 aa18.31■□□□□ 0.52
PIKFYVE-204ENST00000407449 NEK9Q8TD19 979 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms