RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 DHX9Q08211 1270 aaKnown RBP12.04□□□□□ -0.48
ITSN1-207ENST00000399338 DDB1Q16531 1140 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
ITSN1-207ENST00000399338 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
ITSN1-207ENST00000399338 CCDC28BQ9BUN5 200 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 DDX23Q9BUQ8 820 aaKnown RBP12.04□□□□□ -0.48
ITSN1-207ENST00000399338 PCDHA13Q9Y5I0 950 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 KLF18A0A0U1RQI7 1052 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 CPLX1O14810 134 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 UNC5CO95185 931 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 CASP1P29466 404 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 HPCAP84074 193 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 OCRLQ01968 901 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 CLPPQ16740 277 aaPredicted RBP12.04□□□□□ -0.48
ITSN1-207ENST00000399338 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 FAM13CQ8NE31 585 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 TBC1D16Q8TBP0 767 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 IRGQQ8WZA9 623 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 PAGE5Q96GU1 130 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 AGBL1Q96MI9 1066 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 MIS12Q9H081 205 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 DPH5Q9H2P9 285 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 DDX21Q9NR30 783 aaKnown RBP eCLIP12.04□□□□□ -0.48
ITSN1-207ENST00000399338 INTUQ9ULD6 942 aa12.04□□□□□ -0.48
ITSN1-207ENST00000399338 EDC4Q6P2E9 1401 aaKnown RBP12.03□□□□□ -0.48
ITSN1-207ENST00000399338 SKIP12755 728 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 MLH1P40692 756 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 HDAC4P56524 1084 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 RNASELQ05823 741 aaKnown RBP12.03□□□□□ -0.48
ITSN1-207ENST00000399338 SPA17Q15506 151 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 MIGA2Q7L4E1 593 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 IRF2BP1Q8IU81 584 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 ERMNQ8TAM6 284 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 IFIH1Q9BYX4 1025 aaKnown RBP12.03□□□□□ -0.48
ITSN1-207ENST00000399338 SALL4Q9UJQ4 1053 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 TMEM59LQ9UK28 342 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 TMED5Q9Y3A6 229 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 MYO5BQ9ULV0 1848 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 RAD21O60216 631 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 SUN1O94901 812 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 LCA5LO95447 670 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 HARSP12081 509 aaKnown RBP12.03□□□□□ -0.48
ITSN1-207ENST00000399338 VHLP40337 213 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 PIP4K2AP48426 406 aaPredicted RBP12.03□□□□□ -0.48
ITSN1-207ENST00000399338 CEBPAP49715 358 aaPredicted RBP12.03□□□□□ -0.48
ITSN1-207ENST00000399338 TOB1P50616 345 aaPredicted RBP12.03□□□□□ -0.48
ITSN1-207ENST00000399338 PSMD7P51665 324 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 SESN3P58005 492 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 GPSM2P81274 684 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 RASSF7Q02833 373 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 CTDSPL2Q05D32 466 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 WASHC2DQ5SRD0 308 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 TMC3Q7Z5M5 1100 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 HELLSQ9NRZ9 838 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 PRKAG3Q9UGI9 489 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 EFR3BQ9Y2G0 817 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 DAAM1Q9Y4D1 1078 aa12.03□□□□□ -0.48
ITSN1-207ENST00000399338 A0A087X0B3 334 aa12.02□□□□□ -0.48
ITSN1-207ENST00000399338 TRIM43BA6NCK2 446 aa12.02□□□□□ -0.48
ITSN1-207ENST00000399338 AFPP02771 609 aaKnown RBP12.02□□□□□ -0.48
ITSN1-207ENST00000399338 AFMP43652 599 aa12.02□□□□□ -0.48
ITSN1-207ENST00000399338 MTHFSDQ2M296 383 aaKnown RBP12.02□□□□□ -0.48
ITSN1-207ENST00000399338 LIN52Q52LA3 116 aa12.02□□□□□ -0.48
ITSN1-207ENST00000399338 ANKLE1Q8NAG6 615 aa12.02□□□□□ -0.48
ITSN1-207ENST00000399338 SMC6Q96SB8 1091 aa12.02□□□□□ -0.48
ITSN1-207ENST00000399338 LRMDAQ9H2I8 198 aa12.02□□□□□ -0.48
ITSN1-207ENST00000399338 ETNK1Q9HBU6 452 aa12.02□□□□□ -0.48
ITSN1-207ENST00000399338 GPCPD1Q9NPB8 672 aa12.02□□□□□ -0.48
ITSN1-207ENST00000399338 INTS9Q9NV88 658 aaKnown RBP12.02□□□□□ -0.48
ITSN1-207ENST00000399338 ITGB1BP2Q9UKP3 347 aa12.02□□□□□ -0.48
ITSN1-207ENST00000399338 PALLDQ8WX93 1383 aa12.02□□□□□ -0.48
ITSN1-207ENST00000399338 ECE2O60344 883 aa12.02□□□□□ -0.49
ITSN1-207ENST00000399338 EIF3BP55884 814 aaKnown RBP12.02□□□□□ -0.49
ITSN1-207ENST00000399338 HOOK3Q86VS8 718 aa12.02□□□□□ -0.49
ITSN1-207ENST00000399338 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.49
ITSN1-207ENST00000399338 SRPRBQ9Y5M8 271 aaKnown RBP12.02□□□□□ -0.49
ITSN1-207ENST00000399338 PDS5AQ29RF7 1337 aaKnown RBP12.02□□□□□ -0.49
ITSN1-207ENST00000399338 TMEM131LA2VDJ0 1609 aa12.02□□□□□ -0.49
ITSN1-207ENST00000399338 PJA2O43164 708 aa12.02□□□□□ -0.49
ITSN1-207ENST00000399338 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.49
ITSN1-207ENST00000399338 DDX42Q86XP3 938 aaKnown RBP eCLIP12.02□□□□□ -0.49
ITSN1-207ENST00000399338 CATSPER2Q96P56 530 aa12.02□□□□□ -0.49
ITSN1-207ENST00000399338 SELENOSQ9BQE4 189 aa12.02□□□□□ -0.49
ITSN1-207ENST00000399338 LUC7LQ9NQ29 371 aaKnown RBP12.02□□□□□ -0.49
ITSN1-207ENST00000399338 USP20Q9Y2K6 914 aa12.02□□□□□ -0.49
ITSN1-207ENST00000399338 ARL2BPQ9Y2Y0 163 aa12.02□□□□□ -0.49
ITSN1-207ENST00000399338 ATP9BO43861 1147 aa12.01□□□□□ -0.49
ITSN1-207ENST00000399338 ETS2P15036 469 aa12.01□□□□□ -0.49
ITSN1-207ENST00000399338 SMARCA1P28370 1054 aa12.01□□□□□ -0.49
ITSN1-207ENST00000399338 TNNC1P63316 161 aa12.01□□□□□ -0.49
ITSN1-207ENST00000399338 PAK1Q13153 545 aa12.01□□□□□ -0.49
ITSN1-207ENST00000399338 TTLL12Q14166 644 aaPredicted RBP12.01□□□□□ -0.49
ITSN1-207ENST00000399338 KPNB1Q14974 876 aaKnown RBP12.01□□□□□ -0.49
ITSN1-207ENST00000399338 GSTA3Q16772 222 aa12.01□□□□□ -0.49
ITSN1-207ENST00000399338 TMEM132AQ24JP5 1023 aa12.01□□□□□ -0.49
ITSN1-207ENST00000399338 TCERG1LQ5VWI1 586 aa12.01□□□□□ -0.49
ITSN1-207ENST00000399338 SCUBE1Q8IWY4 988 aa12.01□□□□□ -0.49
ITSN1-207ENST00000399338 AGGF1Q8N302 714 aaeCLIP12.01□□□□□ -0.49
ITSN1-207ENST00000399338 PGM2Q96G03 612 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms