RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 ARMCX3Q9UH62 379 aaPredicted RBP10.11□□□□□ -0.79
ATL3-201ENST00000398868 SUGT1Q9Y2Z0 365 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 GSPT1P15170 499 aaKnown RBP10.1□□□□□ -0.79
ATL3-201ENST00000398868 ANXA13P27216 316 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 CRKP46108 304 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 TSPY1Q01534 308 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 SLFN12Q8IYM2 578 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 KCTD17Q8N5Z5 321 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 LBHD1Q9BQE6 289 aaPredicted RBP10.1□□□□□ -0.79
ATL3-201ENST00000398868 SLC7A5P2Q9GIP4 190 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 IRF1P10914 325 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 SOX5P35711 763 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 MSH2P43246 934 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 ERFP50548 548 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 ZNF157P51786 506 aaPredicted RBP10.1□□□□□ -0.79
ATL3-201ENST00000398868 DAB2P98082 770 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 CC2D2BQ6DHV5 1058 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 NOSTRINQ8IVI9 506 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 INTS4Q96HW7 963 aaKnown RBP10.1□□□□□ -0.79
ATL3-201ENST00000398868 ADCY9O60503 1353 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 CDC37Q16543 378 aaPredicted RBP10.1□□□□□ -0.79
ATL3-201ENST00000398868 C16orf87Q6PH81 154 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 TBC1D1Q86TI0 1168 aaPredicted RBP10.1□□□□□ -0.79
ATL3-201ENST00000398868 ATG3Q9NT62 314 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 MAP3K7O43318 606 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 MOCS2O96007 188 aaPredicted RBP10.1□□□□□ -0.79
ATL3-201ENST00000398868 PDCD2Q16342 344 aaPredicted RBP10.1□□□□□ -0.79
ATL3-201ENST00000398868 GRAMD4Q6IC98 578 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 RNF207Q6ZRF8 634 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 SLC35F6Q8N357 371 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 FBXO41Q8TF61 875 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 SERPINB13Q9UIV8 391 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 GNGT2O14610 69 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 NVLO15381 856 aaKnown RBP10.1□□□□□ -0.79
ATL3-201ENST00000398868 KRT3P12035 628 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 HIBCHQ6NVY1 386 aaPredicted RBP10.1□□□□□ -0.79
ATL3-201ENST00000398868 RNF139Q8WU17 664 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 AMNQ9BXJ7 453 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 LRRC4Q9HBW1 653 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 DBNLQ9UJU6 430 aaKnown RBP10.1□□□□□ -0.79
ATL3-201ENST00000398868 ATP10AO60312 1499 aa10.1□□□□□ -0.79
ATL3-201ENST00000398868 CFLARO15519 480 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 PRDX5P30044 214 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 EHHADHQ08426 723 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 SNRNP48Q6IEG0 339 aaKnown RBP10.09□□□□□ -0.79
ATL3-201ENST00000398868 CATSPER4Q7RTX7 472 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 KCTD6Q8NC69 237 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 LZTS2Q9BRK4 669 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 FANCLQ9NW38 375 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 KDM3AQ9Y4C1 1321 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 USP17L5A8MUK1 530 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 PLEKHA8P1O95397 391 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 HADHQ16836 314 aaKnown RBP10.09□□□□□ -0.79
ATL3-201ENST00000398868 KLHL29Q96CT2 875 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 LARSQ9P2J5 1176 aaKnown RBP10.09□□□□□ -0.79
ATL3-201ENST00000398868 MLH3Q9UHC1 1453 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 SART1O43290 800 aaKnown RBP10.09□□□□□ -0.79
ATL3-201ENST00000398868 HMBSP08397 361 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 NME3Q13232 169 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 LGSNQ5TDP6 509 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 NT5C3AQ9H0P0 336 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 EPB41L5Q9HCM4 733 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 ATP8A1Q9Y2Q0 1164 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 ZNF500O60304 480 aaPredicted RBP10.09□□□□□ -0.79
ATL3-201ENST00000398868 SUN1O94901 812 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 ATP5JP18859 108 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 PPP2R5EQ16537 467 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 CYP4F22Q6NT55 531 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 RPGRIP1Q96KN7 1286 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 NUP58Q9BVL2 599 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 MIS12Q9H081 205 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 SCINQ9Y6U3 715 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 ZMYM6O95789 1325 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 METP08581 1390 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 PALLDQ8WX93 1383 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 GOLGA8MH3BSY2 632 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 DPYSL4O14531 572 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 CREB3O43889 395 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 NR2F2P24468 414 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 CYP27A1Q02318 531 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 TFDP1Q14186 410 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 ARHGEF6Q15052 776 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 TMED2Q15363 201 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 RSBN1LQ6PCB5 846 aaPredicted RBP10.09□□□□□ -0.79
ATL3-201ENST00000398868 NLRP10Q86W26 655 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 HOMER3Q9NSC5 361 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 CDK8P49336 464 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 FAM133AQ8N9E0 248 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 RAPGEF5Q92565 580 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 TMEM260Q9NX78 707 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 KDM2BQ8NHM5 1336 aa10.09□□□□□ -0.79
ATL3-201ENST00000398868 UGGT2Q9NYU1 1516 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 USP17L15C9J2P7 530 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 USP17L13C9JLJ4 530 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 USP17L11C9JVI0 530 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 USP17L18D6R9N7 530 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 USP17L22D6RA61 530 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 USP17L17D6RBQ6 530 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 USP17L19D6RCP7 530 aa10.08□□□□□ -0.8
ATL3-201ENST00000398868 USP17L20D6RJB6 530 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms