RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 GAS7O60861 476 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 ZNF131P52739 623 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 UBXN1Q04323 297 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 RBL2Q08999 1139 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 GIT2Q14161 759 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 E4F1Q66K89 784 aaPredicted RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 FRMD5Q7Z6J6 570 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 SMYD4Q8IYR2 804 aaPredicted RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 SPICE1Q8N0Z3 855 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 FBXO40Q9UH90 709 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 CFBP00751 764 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 ANXA13P27216 316 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 STX17P56962 302 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 MAP3K9P80192 1104 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 STK4Q13043 487 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 TBC1D10BQ4KMP7 808 aaPredicted RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 P2RX7Q99572 595 aaKnown RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 TUBGCP2Q9BSJ2 902 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 TCEAL9Q9UHQ7 104 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 MYO6Q9UM54 1294 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 PFASO15067 1338 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 MAPK13O15264 365 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 HNRNPH3P31942 346 aaKnown RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 KRT76Q01546 638 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 MTMR2Q13614 643 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 TSR1Q2NL82 804 aaKnown RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 ANGEL2Q5VTE6 544 aaKnown RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 CCDC170Q8IYT3 715 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 DNERQ8NFT8 737 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 KIF18AQ8NI77 898 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 SYTL5Q8TDW5 730 aaPredicted RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 TANGO6Q9C0B7 1094 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 METTL14Q9HCE5 456 aaKnown RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 TBCAO75347 108 aaKnown RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 CCDC175P0C221 793 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 RPL13P26373 211 aaKnown RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 FKBP3Q00688 224 aaKnown RBP8.19□□□□□ -1.1
RGPD1-201ENST00000398193 COG2Q14746 738 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 MEA1Q16626 185 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 TRERF1Q96PN7 1200 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 PXMP2Q9NR77 195 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 ABHD10Q9NUJ1 306 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 LRRC37A2A6NM11 1700 aa8.19□□□□□ -1.1
RGPD1-201ENST00000398193 POTEB3A0JP26 581 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 POTECB2RU33 542 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 IRF6O14896 467 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 CTIFO43310 598 aaKnown RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 P4HBP07237 508 aaKnown RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 ZNF746Q6NUN9 644 aaPredicted RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 POTEBQ6S5H4 581 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 LRRC55Q6ZSA7 311 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 STAMQ92783 540 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 MKNK1Q9BUB5 465 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 KCTD10Q9H3F6 313 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 ST6GALNAC4Q9H4F1 302 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 ANKEF1Q9NU02 776 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 PPP2R2CQ9Y2T4 447 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 FLOT1O75955 427 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 KRT18P05783 430 aaKnown RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 HOXA13P31271 388 aaPredicted RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 PGM5Q15124 567 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 MIIPQ5JXC2 388 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 NBPF12Q5TAG4 269 aaPredicted RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 SAMD7Q7Z3H4 446 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 SMAP1Q8IYB5 467 aaPredicted RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 TTYH3Q9C0H2 523 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 UNC45AQ9H3U1 944 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 R3HCC1Q9Y3T6 440 aaKnown RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 SHTN1A0MZ66 631 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 B4DLN1 442 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 CXCL11O14625 94 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 SLURP2P0DP57 97 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 IREB2P48200 963 aaKnown RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 SNAP25P60880 206 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 ZBED6P86452 979 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 KCNK18Q7Z418 384 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 VTI1AQ96AJ9 217 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 DCPSQ96C86 337 aaKnown RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 MAP7D2Q96T17 732 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 NOC4LQ9BVI4 516 aaKnown RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 TSGA10Q9BZW7 698 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 TYW1Q9NV66 732 aaKnown RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 SLITRK3O94933 977 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 GYPCP04921 128 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 FCER1AP12319 257 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 ICAM3P32942 547 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 PMS1P54277 932 aaKnown RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 PPATQ06203 517 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 RNF207Q6ZRF8 634 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 WRNIP1Q96S55 665 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 PLIN2Q99541 437 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 MPHOSPH6Q99547 160 aaKnown RBP8.18□□□□□ -1.1
RGPD1-201ENST00000398193 TAB2Q9NYJ8 693 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 SLC45A1Q9Y2W3 748 aa8.18□□□□□ -1.1
RGPD1-201ENST00000398193 E9PMD0 336 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 MTIF2P46199 727 aaKnown RBP8.17□□□□□ -1.1
RGPD1-201ENST00000398193 ARSHQ5FYA8 562 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 C1orf186Q6ZWK4 172 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms