RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 LRRC47Q8N1G4 583 aaKnown RBP15.32■□□□□ 0.04
NUP98-204ENST00000397004 IQCDQ96DY2 449 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 P2RX7Q99572 595 aaKnown RBP15.32■□□□□ 0.04
NUP98-204ENST00000397004 AP1M1Q9BXS5 423 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 NR2E1Q9Y466 385 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 NR1D1P20393 614 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 HSD17B3P37058 310 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 BTDP43251 543 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 CLK2P49760 499 aaKnown RBP15.32■□□□□ 0.04
NUP98-204ENST00000397004 FKBP3Q00688 224 aaKnown RBP15.32■□□□□ 0.04
NUP98-204ENST00000397004 MYCBPAPQ8TBZ2 947 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 CCT8L2Q96SF2 557 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 AIPL1Q9NZN9 384 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 INPP5BP32019 993 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 RAPGEF1Q13905 1077 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 CERKQ8TCT0 537 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 SCFD2Q8WU76 684 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 ATP6V1G3Q96LB4 118 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 C8orf37Q96NL8 207 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 LZTS2Q9BRK4 669 aa15.32■□□□□ 0.04
NUP98-204ENST00000397004 ESYT2A0FGR8 921 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 PPP1R37O75864 691 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 HSPA9P38646 679 aaKnown RBP15.31■□□□□ 0.04
NUP98-204ENST00000397004 BYSLQ13895 437 aaKnown RBP15.31■□□□□ 0.04
NUP98-204ENST00000397004 PDIA5Q14554 519 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 SYN2Q92777 582 aaPredicted RBP15.31■□□□□ 0.04
NUP98-204ENST00000397004 PANK4Q9NVE7 773 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 CAPN7Q9Y6W3 813 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 MEFVO15553 781 aaPredicted RBP15.31■□□□□ 0.04
NUP98-204ENST00000397004 C6orf89Q6UWU4 347 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.31■□□□□ 0.04
NUP98-204ENST00000397004 EDEM3Q9BZQ6 932 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 SLC12A6Q9UHW9 1150 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 TAF1LQ8IZX4 1826 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 COL24A1Q17RW2 1714 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 TMOD1P28289 359 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 MDH1P40925 334 aaKnown RBP15.31■□□□□ 0.04
NUP98-204ENST00000397004 FAM98CQ17RN3 349 aaKnown RBP15.31■□□□□ 0.04
NUP98-204ENST00000397004 ANKRD2Q9GZV1 360 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 TMBIM4Q9HC24 238 aa15.31■□□□□ 0.04
NUP98-204ENST00000397004 SHTN1A0MZ66 631 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 JMJD4Q9H9V9 463 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 RIC8AQ9NPQ8 531 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 NENFQ9UMX5 172 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 POTEB3A0JP26 581 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 POTECB2RU33 542 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 STAT3P40763 770 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 MARSP56192 900 aaKnown RBP15.3■□□□□ 0.04
NUP98-204ENST00000397004 PSMC6P62333 389 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 ZNF844Q08AG5 666 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 PAK2Q13177 524 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 FAM26FQ5R3K3 315 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 CEP85LQ5SZL2 805 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 UBAP2Q5T6F2 1119 aaKnown RBP15.3■□□□□ 0.04
NUP98-204ENST00000397004 POTEBQ6S5H4 581 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 NBPF5PQ86XG9 351 aaPredicted RBP15.3■□□□□ 0.04
NUP98-204ENST00000397004 ZC3H3Q8IXZ2 948 aaKnown RBP15.3■□□□□ 0.04
NUP98-204ENST00000397004 PAGR1Q9BTK6 254 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 KCNK3O14649 394 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 TNNI2P48788 182 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 GJB7Q6PEY0 223 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 GPCPD1Q9NPB8 672 aa15.3■□□□□ 0.04
NUP98-204ENST00000397004 HPDP32754 393 aaPredicted RBP15.29■□□□□ 0.04
NUP98-204ENST00000397004 SLC16A2P36021 539 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 CCDC40Q4G0X9 1142 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 SWT1Q5T5J6 900 aaKnown RBP15.29■□□□□ 0.04
NUP98-204ENST00000397004 SOGA3Q5TF21 947 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 NLRP14Q86W24 1093 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 PROM2Q8N271 834 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 DDX47Q9H0S4 455 aaKnown RBP15.29■□□□□ 0.04
NUP98-204ENST00000397004 SEC63Q9UGP8 760 aaKnown RBP15.29■□□□□ 0.04
NUP98-204ENST00000397004 FSBPO95073 299 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 KCNH2Q12809 1159 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 SHROOM1Q2M3G4 852 aaPredicted RBP15.29■□□□□ 0.04
NUP98-204ENST00000397004 MCTP2Q6DN12 878 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 METTL13Q8N6R0 699 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 NGLY1Q96IV0 654 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 RUFY1Q96T51 708 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 CYP11B2P19099 503 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 PDE4CQ08493 712 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 KLHL30Q0D2K2 578 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 CDK5RAP3Q96JB5 506 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 FAM107BQ9H098 131 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 TAF1DQ9H5J8 278 aaPredicted RBP15.29■□□□□ 0.04
NUP98-204ENST00000397004 ANKIB1Q9P2G1 1089 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 KIAA1024Q9UPX6 916 aa15.29■□□□□ 0.04
NUP98-204ENST00000397004 GPR75-ASB3A0A0A6YYF3 556 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 MED24O75448 989 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 SNHG28P0DPA3 235 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 AKR1B1P15121 316 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 RFC4P35249 363 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 KCNA1Q09470 495 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 SPTY2D1Q68D10 685 aaPredicted RBP15.28■□□□□ 0.04
NUP98-204ENST00000397004 CELF4Q9BZC1 486 aaKnown RBP15.28■□□□□ 0.04
NUP98-204ENST00000397004 ISCUQ9H1K1 167 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 KIF4AO95239 1232 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 SSBP05455 408 aaKnown RBP eCLIP15.28■□□□□ 0.04
NUP98-204ENST00000397004 ADCY7P51828 1080 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 PSMD2Q13200 908 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms