RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.86■□□□□ 0.45
SNX6-202ENST00000396526 FAM184BQ9ULE4 1060 aa17.86■□□□□ 0.45
SNX6-202ENST00000396526 NDUFA10O95299 355 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 EDEM3Q9BZQ6 932 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 CACNB1Q02641 598 aaPredicted RBP17.85■□□□□ 0.45
SNX6-202ENST00000396526 GIT2Q14161 759 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 EPHA7Q15375 998 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 SPA17Q15506 151 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 KIAA1328Q86T90 577 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 TEPSINQ96N21 525 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.85■□□□□ 0.45
SNX6-202ENST00000396526 FRMD3A2A2Y4 597 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 PSMD10O75832 226 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 ERVK-24P63145 666 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 UBXN2AP68543 259 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 NCBP1Q09161 790 aaKnown RBP17.85■□□□□ 0.45
SNX6-202ENST00000396526 ADAM9Q13443 819 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 MIIPQ5JXC2 388 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 EHBP1Q8NDI1 1231 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 ANKRD7Q92527 254 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 AGBL1Q96MI9 1066 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 MXRA8Q9BRK3 442 aa17.85■□□□□ 0.45
SNX6-202ENST00000396526 NUCKS1Q9H1E3 243 aaKnown RBP17.85■□□□□ 0.45
SNX6-202ENST00000396526 MRPL44Q9H9J2 332 aaKnown RBP17.85■□□□□ 0.45
SNX6-202ENST00000396526 PPP2R3AQ06190 1150 aa17.84■□□□□ 0.45
SNX6-202ENST00000396526 ZNF569Q5MCW4 686 aa17.84■□□□□ 0.45
SNX6-202ENST00000396526 LRRC55Q6ZSA7 311 aa17.84■□□□□ 0.45
SNX6-202ENST00000396526 TXLNBQ8N3L3 684 aa17.84■□□□□ 0.45
SNX6-202ENST00000396526 HAUS4Q9H6D7 363 aa17.84■□□□□ 0.45
SNX6-202ENST00000396526 NPHP3-ACAD11A0A0J9YXS1 232 aa17.84■□□□□ 0.45
SNX6-202ENST00000396526 SHTN1A0MZ66 631 aa17.84■□□□□ 0.45
SNX6-202ENST00000396526 IPO5O00410 1097 aaKnown RBP17.84■□□□□ 0.45
SNX6-202ENST00000396526 CCDC42Q96M95 316 aa17.84■□□□□ 0.45
SNX6-202ENST00000396526 REEP2Q9BRK0 252 aa17.84■□□□□ 0.45
SNX6-202ENST00000396526 RGL1Q9NZL6 768 aa17.84■□□□□ 0.45
SNX6-202ENST00000396526 FZD9O00144 591 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 HSD17B4P51659 736 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 PSMC6P62333 389 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 R3HDM1Q15032 1099 aaKnown RBP17.83■□□□□ 0.45
SNX6-202ENST00000396526 ARSHQ5FYA8 562 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 ARHGAP27Q6ZUM4 889 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 HSD17B14Q9BPX1 270 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 WDR18Q9BV38 432 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 DEF6Q9H4E7 631 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 CTAGE9A4FU28 777 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 CTTNQ14247 550 aaKnown RBP17.83■□□□□ 0.45
SNX6-202ENST00000396526 KNOP1Q1ED39 458 aaKnown RBP17.83■□□□□ 0.45
SNX6-202ENST00000396526 NIPA1Q7RTP0 329 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 ACRBPQ8NEB7 543 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 SCFD1Q8WVM8 642 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 DYDC2Q96IM9 177 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 KCND2Q9NZV8 630 aa17.83■□□□□ 0.45
SNX6-202ENST00000396526 KRT86O43790 486 aa17.83■□□□□ 0.44
SNX6-202ENST00000396526 BCRP11274 1271 aa17.83■□□□□ 0.44
SNX6-202ENST00000396526 SPP2Q13103 211 aa17.83■□□□□ 0.44
SNX6-202ENST00000396526 ZCWPW2Q504Y3 356 aa17.83■□□□□ 0.44
SNX6-202ENST00000396526 SFR1Q86XK3 245 aa17.83■□□□□ 0.44
SNX6-202ENST00000396526 CCDC43Q96MW1 224 aaKnown RBP17.83■□□□□ 0.44
SNX6-202ENST00000396526 CHP1Q99653 195 aa17.83■□□□□ 0.44
SNX6-202ENST00000396526 SLC38A10Q9HBR0 1119 aa17.83■□□□□ 0.44
SNX6-202ENST00000396526 PPP1R9AQ9ULJ8 1098 aa17.83■□□□□ 0.44
SNX6-202ENST00000396526 SCAF8Q9UPN6 1271 aaKnown RBP17.83■□□□□ 0.44
SNX6-202ENST00000396526 PPP1R12BO60237 982 aaPredicted RBP17.82■□□□□ 0.44
SNX6-202ENST00000396526 CDK17Q00537 523 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 MEA1Q16626 185 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 SCYL3Q8IZE3 742 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 FAM207AQ9NSI2 230 aaPredicted RBP17.82■□□□□ 0.44
SNX6-202ENST00000396526 SEL1LQ9UBV2 794 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 RNF225M0QZC1 329 aaPredicted RBP17.82■□□□□ 0.44
SNX6-202ENST00000396526 EML1O00423 815 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 PDXKO00764 312 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 MTMR2Q13614 643 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 WDR24Q96S15 920 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 RAVER2Q9HCJ3 691 aaKnown RBP17.82■□□□□ 0.44
SNX6-202ENST00000396526 AGPAT5Q9NUQ2 364 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 KIF13BQ9NQT8 1826 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 GCNT3O95395 438 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 NR2F2P24468 414 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 MIER3Q7Z3K6 550 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 MYCT1Q8N699 235 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 METTL14Q9HCE5 456 aaKnown RBP17.82■□□□□ 0.44
SNX6-202ENST00000396526 ARGLU1Q9NWB6 273 aaPredicted RBP17.82■□□□□ 0.44
SNX6-202ENST00000396526 PCDHA2Q9Y5H9 948 aa17.82■□□□□ 0.44
SNX6-202ENST00000396526 ARHGEF35A5YM69 484 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 USO1O60763 962 aaKnown RBP17.81■□□□□ 0.44
SNX6-202ENST00000396526 SLITRK3O94933 977 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 TUBB4BP68371 445 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 NBPF12Q5TAG4 269 aaPredicted RBP17.81■□□□□ 0.44
SNX6-202ENST00000396526 GLIS3Q8NEA6 775 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 TTYH3Q9C0H2 523 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 RPAP3Q9H6T3 665 aaPredicted RBP17.81■□□□□ 0.44
SNX6-202ENST00000396526 RASSF7Q02833 373 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 RINT1Q6NUQ1 792 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 ZNF710Q8N1W2 664 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 ZNF280CQ8ND82 737 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 PIGOQ8TEQ8 1089 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 PARVGQ9HBI0 331 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 LUC7LQ9NQ29 371 aaKnown RBP17.81■□□□□ 0.44
SNX6-202ENST00000396526 HOMER2Q9NSB8 354 aa17.81■□□□□ 0.44
SNX6-202ENST00000396526 ARMCX3Q9UH62 379 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms