RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 TTLL6Q8N841 843 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 GMCL1P1Q8NEA9 526 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 RUFY1Q96T51 708 aa12.74□□□□□ -0.37
PDXDC1-202ENST00000396410 PLEKP08567 350 aaPredicted RBP12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 CLK2P49760 499 aaKnown RBP12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 FKBP1AP62942 108 aaKnown RBP12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 WDR59Q6PJI9 974 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 CPXCR1Q8N123 301 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 PIGOQ8TEQ8 1089 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 GMCL1Q96IK5 515 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 ST7Q9NRC1 585 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 ZBTB21Q9ULJ3 1066 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 TBX3O15119 743 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 CYP11B2P19099 503 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 FIGNQ5HY92 759 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 SFI1A8K8P3 1242 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 PSMD14O00487 310 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 ECE1P42892 770 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 ZNF277Q9NRM2 450 aaPredicted RBP12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 CEP72Q9P209 647 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 FHOD1Q9Y613 1164 aa12.73□□□□□ -0.37
PDXDC1-202ENST00000396410 ZSCAN20P17040 1043 aaPredicted RBP12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 GFPT1Q06210 699 aaPredicted RBP12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 RTKN2Q8IZC4 609 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 JDP2Q8WYK2 163 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 ABCB6Q9NP58 842 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 PLAGL2Q9UPG8 496 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 CLIC2O15247 247 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 TFRCP02786 760 aaKnown RBP12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 COBLL1Q53SF7 1204 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 MOXD1Q6UVY6 613 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 MAEAQ7L5Y9 396 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 EIF2AK1Q9BQI3 630 aaKnown RBP12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 ZNF577Q9BSK1 485 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 MLXIPQ9HAP2 919 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 RGL1Q9NZL6 768 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 JRKLQ9Y4A0 524 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 TAF1LQ8IZX4 1826 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 ARHGEF35A5YM69 484 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 MEIS2O14770 477 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 FECHP22830 423 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 MEA1Q16626 185 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 PDXDC1Q6P996 788 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 SH3BP5LQ7L8J4 393 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 FAM133AQ8N9E0 248 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 REEP2Q9BRK0 252 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 HOMER2Q9NSB8 354 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 ABCB11O95342 1321 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 SERPING1P05155 500 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 RPA1P27694 616 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 TATDN1Q6P1N9 297 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 DNAJC19Q96DA6 116 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 LACRTQ9GZZ8 138 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 VPS18Q9P253 973 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 FRMD4BQ9Y2L6 1034 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 DUSP10Q9Y6W6 482 aa12.72□□□□□ -0.37
PDXDC1-202ENST00000396410 LY75O60449 1722 aa12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 MSH4O15457 936 aa12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 AFPP02771 609 aaKnown RBP12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 KCNH2Q12809 1159 aa12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 EXOC3L4Q17RC7 722 aa12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 KNOP1Q1ED39 458 aaKnown RBP12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 KCNMB3Q9NPA1 279 aa12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 ZNF70Q9UC06 446 aaPredicted RBP12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 REXO2Q9Y3B8 237 aaKnown RBP12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 HYOU1Q9Y4L1 999 aa12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 DDX60LQ5H9U9 1706 aaKnown RBP12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 PHACTR2O75167 634 aa12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 UTP14CQ5TAP6 766 aaKnown RBP12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 RSBN1LQ6PCB5 846 aaPredicted RBP12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 ACER1Q8TDN7 264 aa12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 TBC1D5Q92609 795 aa12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 TEKT3Q9BXF9 490 aa12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 CCPG1Q9ULG6 757 aa12.71□□□□□ -0.37
PDXDC1-202ENST00000396410 ANO9A1A5B4 782 aa12.71□□□□□ -0.38
PDXDC1-202ENST00000396410 SLC26A4O43511 780 aa12.71□□□□□ -0.38
PDXDC1-202ENST00000396410 SREBF1P36956 1147 aa12.71□□□□□ -0.38
PDXDC1-202ENST00000396410 TERF2Q15554 542 aa12.71□□□□□ -0.38
PDXDC1-202ENST00000396410 METTL14Q9HCE5 456 aaKnown RBP12.71□□□□□ -0.38
PDXDC1-202ENST00000396410 PITPNM2Q9BZ72 1349 aa12.71□□□□□ -0.38
PDXDC1-202ENST00000396410 TMCO5BA8MYB1 307 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 FAM86B1E9PN63 330 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 FAM86B2P0C5J1 330 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 Q4G0T1 1027 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 FAM178BQ8IXR5 827 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 DYDC2Q96IM9 177 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 GAP43P17677 238 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 CXCR5P32302 372 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 LMAN1P49257 510 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 PSMC6P62333 389 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 SLC15A2Q16348 729 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 IFI16Q16666 785 aaKnown RBP12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 GBP6Q6ZN66 633 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 FAM151AQ8WW52 585 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 MTMR8Q96EF0 704 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 GDAP1L1Q96MZ0 367 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms