RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 DDX4Q9NQI0 724 aaKnown RBP17.29■□□□□ 0.36
HOXA3-202ENST00000396352 POLLQ9UGP5 575 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 QSER1Q2KHR3 1735 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 POTEB3A0JP26 581 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 POTECB2RU33 542 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 SLC16A2P36021 539 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 DPY19L2P1Q6NXN4 242 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 POTEBQ6S5H4 581 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 IQCKQ8N0W5 287 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 CERKQ8TCT0 537 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 EPB41L5Q9HCM4 733 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 LUC7LQ9NQ29 371 aaKnown RBP17.28■□□□□ 0.36
HOXA3-202ENST00000396352 FRMD3A2A2Y4 597 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 CYP11B2P19099 503 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 DNA2P51530 1060 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 GUCY2DQ02846 1103 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 KIAA0753Q2KHM9 967 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 GPBP1Q86WP2 473 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 TBC1D22AQ8WUA7 517 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 PIK3R5Q8WYR1 880 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 UIMC1Q96RL1 719 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 RUFY1Q96T51 708 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 BMP2KQ9NSY1 1161 aaPredicted RBP17.28■□□□□ 0.36
HOXA3-202ENST00000396352 ADAMTS1Q9UHI8 967 aa17.28■□□□□ 0.36
HOXA3-202ENST00000396352 USP17L10C9JJH3 530 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 ZBTB5O15062 677 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 KRT14P02533 472 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 MRPL12P52815 198 aaKnown RBP17.27■□□□□ 0.36
HOXA3-202ENST00000396352 ARID5AQ03989 594 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 EFCAB13Q8IY85 973 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 ADAMTSL1Q8N6G6 1762 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 ZNF233A6NK53 670 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 NOP2P46087 812 aaKnown RBP17.27■□□□□ 0.36
HOXA3-202ENST00000396352 KLHL30Q0D2K2 578 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 ARSHQ5FYA8 562 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 TTC19Q6DKK2 380 aaPredicted RBP17.27■□□□□ 0.36
HOXA3-202ENST00000396352 MREGQ8N565 214 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 BCAS4Q8TDM0 211 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 CASKIN2Q8WXE0 1202 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 PPM1EQ8WY54 764 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 CCDC43Q96MW1 224 aaKnown RBP17.27■□□□□ 0.36
HOXA3-202ENST00000396352 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.27■□□□□ 0.369e-9■■■■■ 36.7
HOXA3-202ENST00000396352 PSTPIP2Q9H939 334 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 KCNMB3Q9NPA1 279 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 EMILIN3Q9NT22 766 aa17.27■□□□□ 0.36
HOXA3-202ENST00000396352 PAK2Q13177 524 aa17.27■□□□□ 0.35
HOXA3-202ENST00000396352 SF3B2Q13435 895 aaKnown RBP17.27■□□□□ 0.35
HOXA3-202ENST00000396352 HERC4Q5GLZ8 1057 aaPredicted RBP17.27■□□□□ 0.35
HOXA3-202ENST00000396352 TRAPPC3LQ5T215 181 aa17.27■□□□□ 0.35
HOXA3-202ENST00000396352 TBC1D16Q8TBP0 767 aa17.27■□□□□ 0.35
HOXA3-202ENST00000396352 KRT12Q99456 494 aa17.27■□□□□ 0.35
HOXA3-202ENST00000396352 LRRC37AA6NMS7 1700 aa17.27■□□□□ 0.35
HOXA3-202ENST00000396352 MARCH6O60337 910 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 CLSTN1O94985 981 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 ADAM9Q13443 819 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 ASIC2Q16515 512 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 EDRF1Q3B7T1 1238 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 SH2D3CQ8N5H7 860 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 TMEM59LQ9UK28 342 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 BTNL10A8MVZ5 291 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 MYBP10242 640 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 SHMT1P34896 483 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 CASP5P51878 434 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 SLC12A3P55017 1021 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 KCNH2Q12809 1159 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 TRADDQ15628 312 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 KCTD1Q719H9 257 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 IFT81Q8WYA0 676 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 SWAP70Q9UH65 585 aa17.26■□□□□ 0.35
HOXA3-202ENST00000396352 MED24O75448 989 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 CPP00450 1065 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 USP38Q8NB14 1042 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 RABEP2Q9H5N1 569 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 ACTN1P12814 892 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 PTK2Q05397 1052 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 ENOX2Q16206 610 aaKnown RBP17.25■□□□□ 0.35
HOXA3-202ENST00000396352 CDC37Q16543 378 aaPredicted RBP17.25■□□□□ 0.35
HOXA3-202ENST00000396352 GPATCH4Q5T3I0 446 aaKnown RBP17.25■□□□□ 0.35
HOXA3-202ENST00000396352 IRF2BP2Q7Z5L9 587 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 SERPINB13Q9UIV8 391 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 USP17L15C9J2P7 530 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 USP17L13C9JLJ4 530 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 USP17L11C9JVI0 530 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 USP17L18D6R9N7 530 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 USP17L22D6RA61 530 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 USP17L17D6RBQ6 530 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 USP17L19D6RCP7 530 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 USP17L20D6RJB6 530 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 STAT3P40763 770 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 USP17L24Q0WX57 530 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 TTC31Q49AM3 519 aaPredicted RBP17.25■□□□□ 0.35
HOXA3-202ENST00000396352 KCTD16Q68DU8 428 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
HOXA3-202ENST00000396352 MYO3BQ8WXR4 1341 aa17.24■□□□□ 0.35
HOXA3-202ENST00000396352 RAD51CO43502 376 aa17.24■□□□□ 0.35
HOXA3-202ENST00000396352 VPS72Q15906 364 aa17.24■□□□□ 0.35
HOXA3-202ENST00000396352 CD302Q8IX05 232 aa17.24■□□□□ 0.35
HOXA3-202ENST00000396352 PITPNM2Q9BZ72 1349 aa17.24■□□□□ 0.35
HOXA3-202ENST00000396352 CES2O00748 559 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms