RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 CCDC175P0C221 793 aa22.26■■□□□ 1.15
PTPN11-202ENST00000392597 PTPRAP18433 802 aa22.26■■□□□ 1.15
PTPN11-202ENST00000392597 KRT9P35527 623 aa22.26■■□□□ 1.15
PTPN11-202ENST00000392597 FKBP3Q00688 224 aaKnown RBP22.26■■□□□ 1.15
PTPN11-202ENST00000392597 SPP2Q13103 211 aa22.26■■□□□ 1.15
PTPN11-202ENST00000392597 PABPC4Q13310 644 aaKnown RBP eCLIP22.26■■□□□ 1.151e-94■■■■■ 156.1
PTPN11-202ENST00000392597 CYP26C1Q6V0L0 522 aa22.26■■□□□ 1.15
PTPN11-202ENST00000392597 C12orf42Q96LP6 360 aa22.26■■□□□ 1.15
PTPN11-202ENST00000392597 WRNIP1Q96S55 665 aa22.26■■□□□ 1.15
PTPN11-202ENST00000392597 ZNF577Q9BSK1 485 aa22.26■■□□□ 1.15
PTPN11-202ENST00000392597 GGA3Q9NZ52 723 aa22.26■■□□□ 1.15
PTPN11-202ENST00000392597 SOWAHDA6NJG2 315 aa22.25■■□□□ 1.15
PTPN11-202ENST00000392597 LRRC41Q15345 812 aa22.25■■□□□ 1.15
PTPN11-202ENST00000392597 FIGNQ5HY92 759 aa22.25■■□□□ 1.15
PTPN11-202ENST00000392597 FKBP15Q5T1M5 1219 aa22.25■■□□□ 1.15
PTPN11-202ENST00000392597 TRIM65Q6PJ69 517 aa22.25■■□□□ 1.15
PTPN11-202ENST00000392597 B3GNT9Q6UX72 402 aa22.25■■□□□ 1.15
PTPN11-202ENST00000392597 PPP4R3CPQ6ZMV5 832 aa22.25■■□□□ 1.15
PTPN11-202ENST00000392597 GLIS3Q8NEA6 775 aa22.25■■□□□ 1.15
PTPN11-202ENST00000392597 CEP63Q96MT8 703 aa22.25■■□□□ 1.15
PTPN11-202ENST00000392597 DNAJC7Q99615 494 aa22.25■■□□□ 1.15
PTPN11-202ENST00000392597 LUC7L2Q9Y383 392 aaKnown RBP22.25■■□□□ 1.15
PTPN11-202ENST00000392597 CTDP1Q9Y5B0 961 aaPredicted RBP22.25■■□□□ 1.15
PTPN11-202ENST00000392597 NPHP3-ACAD11A0A0J9YXS1 232 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 ALAS1P13196 640 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 UBXN2AP68543 259 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 CYP4A11Q02928 519 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 MAN2A1Q16706 1144 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 EAPPQ56P03 285 aaPredicted RBP22.24■■□□□ 1.15
PTPN11-202ENST00000392597 RAD9BQ6WBX8 426 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 OR8K1Q8NGG5 319 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 TEKT3Q9BXF9 490 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 GPBP1L1Q9HC44 474 aaPredicted RBP22.24■■□□□ 1.15
PTPN11-202ENST00000392597 RAVER2Q9HCJ3 691 aaKnown RBP22.24■■□□□ 1.15
PTPN11-202ENST00000392597 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.24■■□□□ 1.15
PTPN11-202ENST00000392597 ADGRG1Q9Y653 693 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 LOXHD1Q8IVV2 1947 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 TTC26A0AVF1 554 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 C19orf81C9J6K1 198 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 IPO5O00410 1097 aaKnown RBP22.24■■□□□ 1.15
PTPN11-202ENST00000392597 SLITRK3O94933 977 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 EPHA7Q15375 998 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 VWA3BQ502W6 1294 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 PCNX4Q63HM2 1172 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 SYT10Q6XYQ8 523 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 CPXCR1Q8N123 301 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 NEK9Q8TD19 979 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 EEF2KMTQ96G04 330 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 TTYH3Q9C0H2 523 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 RGL1Q9NZL6 768 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 COL20A1Q9P218 1284 aa22.24■■□□□ 1.15
PTPN11-202ENST00000392597 PHIPQ8WWQ0 1821 aa22.23■■□□□ 1.15
PTPN11-202ENST00000392597 RNF225M0QZC1 329 aaPredicted RBP22.23■■□□□ 1.15
PTPN11-202ENST00000392597 GNA14O95837 355 aa22.23■■□□□ 1.15
PTPN11-202ENST00000392597 ARP10275 920 aa22.23■■□□□ 1.15
PTPN11-202ENST00000392597 NOL9Q5SY16 702 aaKnown RBP22.23■■□□□ 1.15
PTPN11-202ENST00000392597 ZC3H3Q8IXZ2 948 aaKnown RBP22.23■■□□□ 1.15
PTPN11-202ENST00000392597 SYTL5Q8TDW5 730 aaPredicted RBP22.23■■□□□ 1.15
PTPN11-202ENST00000392597 SCFD1Q8WVM8 642 aa22.23■■□□□ 1.15
PTPN11-202ENST00000392597 REEP2Q9BRK0 252 aa22.23■■□□□ 1.15
PTPN11-202ENST00000392597 BHMT2Q9H2M3 363 aa22.23■■□□□ 1.15
PTPN11-202ENST00000392597 A0A1W2PQJ5 194 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 VWA5AO00534 786 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 DGKZQ13574 1117 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 MTF1Q14872 753 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 SYCP1Q15431 976 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 EDRF1Q3B7T1 1238 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 ZKSCAN4Q969J2 545 aaPredicted RBP22.22■■□□□ 1.15
PTPN11-202ENST00000392597 KLRG1Q96E93 195 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 KCTD10Q9H3F6 313 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 NDST4Q9H3R1 872 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 GAP43P17677 238 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 ITGB5P18084 799 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 OAZ1P54368 228 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 TSR1Q2NL82 804 aaKnown RBP22.22■■□□□ 1.15
PTPN11-202ENST00000392597 SUPT20HL1Q3ZLR7 823 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 MUM1L1Q5H9M0 696 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 DCPSQ96C86 337 aaKnown RBP22.22■■□□□ 1.15
PTPN11-202ENST00000392597 DYDC2Q96IM9 177 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 FGFBP2Q9BYJ0 223 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 UNC45AQ9H3U1 944 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 KCND2Q9NZV8 630 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 TBC1D7Q9P0N9 293 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 COL4A3BPQ9Y5P4 624 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 UBIAD1Q9Y5Z9 338 aa22.22■■□□□ 1.15
PTPN11-202ENST00000392597 RLFQ13129 1914 aa22.21■■□□□ 1.15
PTPN11-202ENST00000392597 POLR2AP24928 1970 aaKnown RBP22.21■■□□□ 1.15
PTPN11-202ENST00000392597 TRIM21P19474 475 aaKnown RBP22.21■■□□□ 1.15
PTPN11-202ENST00000392597 YY1P25490 414 aa22.21■■□□□ 1.15
PTPN11-202ENST00000392597 MARSP56192 900 aaKnown RBP22.21■■□□□ 1.15
PTPN11-202ENST00000392597 ERVK-24P63145 666 aa22.21■■□□□ 1.15
PTPN11-202ENST00000392597 CACNB1Q02641 598 aaPredicted RBP22.21■■□□□ 1.15
PTPN11-202ENST00000392597 EPM2AIP1Q7L775 607 aaPredicted RBP22.21■■□□□ 1.15
PTPN11-202ENST00000392597 NACC1Q96RE7 527 aa22.21■■□□□ 1.15
PTPN11-202ENST00000392597 L2HGDHQ9H9P8 463 aa22.21■■□□□ 1.15
PTPN11-202ENST00000392597 TRAF5O00463 557 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 TBCAO75347 108 aaKnown RBP22.2■■□□□ 1.14
PTPN11-202ENST00000392597 ZBED6P86452 979 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 RAD51AP2Q09MP3 1159 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 CTTNQ14247 550 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms