RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 PPARDQ03181 441 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 FOXD4Q12950 439 aaPredicted RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 PABPC4Q13310 644 aaKnown RBP eCLIP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 SNW1Q13573 536 aaKnown RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 MOGSQ13724 837 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 IKBKEQ14164 716 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 MAPK6Q16659 721 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 LINC00303Q3SY05 128 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 SGO2Q562F6 1265 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 FAM47AQ5JRC9 791 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 CAPRIN2Q6IMN6 1127 aaKnown RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 INO80CQ6PI98 192 aaPredicted RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 CLEC4GQ6UXB4 293 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 RSPO2Q6UXX9 243 aaPredicted RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 MAMSTRQ6ZN01 415 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 DDX46Q7L014 1031 aaKnown RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 SV2AQ7L0J3 742 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 DPP9Q86TI2 863 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 SLCO6A1Q86UG4 719 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 KBTBD6Q86V97 674 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 SIAH1Q8IUQ4 282 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 KIAA0825Q8IV33 1275 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 USHBP1Q8N6Y0 703 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 PCSK9Q8NBP7 692 aaKnown RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 USP6NLQ92738 828 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 NXPE3Q969Y0 559 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 CLDN23Q96B33 292 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 C18orf12Q96KH6 178 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 HEXIM2Q96MH2 286 aaKnown RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 AGBL1Q96MI9 1066 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 ALPK1Q96QP1 1244 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 YME1L1Q96TA2 773 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 CDCA3Q99618 268 aaPredicted RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 NUSAP1Q9BXS6 441 aaKnown RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 DPH1Q9BZG8 443 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 WNT8AQ9H1J5 351 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 ADAM7Q9H2U9 754 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 BMP2KQ9NSY1 1161 aaPredicted RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 GJB4Q9NTQ9 266 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 FAM217BQ9NTX9 383 aaPredicted RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 FLRT1Q9NZU1 646 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 APEX2Q9UBZ4 518 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 ZBTB1Q9Y2K1 713 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 RWDD3Q9Y3V2 267 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 LAS1LQ9Y4W2 734 aaKnown RBP1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 KDRP35968 1356 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 CEMIPQ8WUJ3 1361 aa1.54□□□□□ -2.16
RNU6-42P-201ENST00000384165 BCLAF3A2AJT9 711 aaKnown RBP1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 GOLGA8CPA6NN73 597 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 TBKBP1A7MCY6 615 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 U2SURPO15042 1029 aaKnown RBP1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 N4BP3O15049 544 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 PHF1O43189 567 aaPredicted RBP1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 SH3BP5O60239 455 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 AMHP03971 560 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 RBMY1A1P0DJD3 496 aaKnown RBP1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 CYBAP13498 195 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 BPIP17213 487 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 SMARCA1P28370 1054 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 UQCRFS1P47985 274 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 TNNI2P48788 182 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 AMPHP49418 695 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 FOSBP53539 338 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 DEFB103AP81534 67 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 APBA1Q02410 837 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 PRKCQQ04759 706 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 SLC44A4Q53GD3 710 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 MORN1Q5T089 497 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 WDR78Q5VTH9 848 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 EDC4Q6P2E9 1401 aaKnown RBP1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 SYCE2Q6PIF2 218 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 PDZRN4Q6ZMN7 1036 aaPredicted RBP1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 ZNF852Q6ZMS4 543 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 NCCRP1Q6ZVX7 275 aaPredicted RBP1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 USP53Q70EK8 1073 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 ADGRD2Q7Z7M1 963 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 FIBCD1Q8N539 461 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 SPRYD3Q8NCJ5 442 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 GALNT11Q8NCW6 608 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 BAHD1Q8TBE0 780 aaPredicted RBP1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 ATP8B4Q8TF62 1192 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 GAB3Q8WWW8 586 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 MYO3BQ8WXR4 1341 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 EXTL1Q92935 676 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 C5orf34Q96MH7 638 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 IER2Q9BTL4 223 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 C19orf24Q9BVV8 132 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 SEZ6LQ9BYH1 1024 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 AMBRA1Q9C0C7 1298 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 TRPV6Q9H1D0 765 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 LRTM1Q9HBL6 345 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 SPC25Q9HBM1 224 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 MBD1Q9UIS9 605 aaPredicted RBP1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 CDH22Q9UJ99 828 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 PLXNB3Q9ULL4 1909 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 TRAK1Q9UPV9 953 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 SHANK1Q9Y566 2161 aa1.53□□□□□ -2.16
RNU6-42P-201ENST00000384165 STAB2Q8WWQ8 2551 aa1.53□□□□□ -2.17
RNU6-42P-201ENST00000384165 KNTC1P50748 2209 aa1.52□□□□□ -2.17
RNU6-42P-201ENST00000384165 MYH14Q7Z406 1995 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms