RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 PSMD10O75832 226 aa16.8■□□□□ 0.28
VCX3B-201ENST00000381029 SYN1P17600 705 aa16.8■□□□□ 0.28
VCX3B-201ENST00000381029 ACTR2P61160 394 aa16.8■□□□□ 0.28
VCX3B-201ENST00000381029 MFSD10Q14728 455 aa16.8■□□□□ 0.28
VCX3B-201ENST00000381029 NEK8Q86SG6 692 aa16.8■□□□□ 0.28
VCX3B-201ENST00000381029 EMSYQ7Z589 1322 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 DCDC2CA8MYV0 355 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 H3BRB1 525 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 NOP56O00567 594 aaKnown RBP16.79■□□□□ 0.28
VCX3B-201ENST00000381029 U2AF2P26368 475 aaKnown RBP eCLIP16.79■□□□□ 0.28
VCX3B-201ENST00000381029 GJB2P29033 226 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 ADAM17P78536 824 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 SP4Q02446 784 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 KIAA0753Q2KHM9 967 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 ABHD15Q6UXT9 468 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 GJA10Q969M2 543 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 UIMC1Q96RL1 719 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 RIT2Q99578 217 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 ZNF577Q9BSK1 485 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 FOXP1Q9H334 677 aaPredicted RBP16.79■□□□□ 0.28
VCX3B-201ENST00000381029 TUT1Q9H6E5 874 aaKnown RBP16.79■□□□□ 0.28
VCX3B-201ENST00000381029 TBC1D22BQ9NU19 505 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 TRMT13Q9NUP7 481 aaKnown RBP16.79■□□□□ 0.28
VCX3B-201ENST00000381029 GTF2IRD1Q9UHL9 959 aa16.79■□□□□ 0.28
VCX3B-201ENST00000381029 GCFC2P16383 781 aaKnown RBP16.78■□□□□ 0.28
VCX3B-201ENST00000381029 TRIM29Q14134 588 aa16.78■□□□□ 0.28
VCX3B-201ENST00000381029 LETM2Q2VYF4 491 aa16.78■□□□□ 0.28
VCX3B-201ENST00000381029 GDF6Q6KF10 455 aaPredicted RBP16.78■□□□□ 0.28
VCX3B-201ENST00000381029 FAM184AQ8NB25 1140 aa16.78■□□□□ 0.28
VCX3B-201ENST00000381029 HAS1Q92839 578 aa16.78■□□□□ 0.28
VCX3B-201ENST00000381029 VWCEQ96DN2 955 aa16.78■□□□□ 0.28
VCX3B-201ENST00000381029 SDF4Q9BRK5 362 aa16.78■□□□□ 0.28
VCX3B-201ENST00000381029 KATNAL1Q9BW62 490 aa16.78■□□□□ 0.28
VCX3B-201ENST00000381029 RNPEPQ9H4A4 650 aa16.78■□□□□ 0.28
VCX3B-201ENST00000381029 BRMS1Q9HCU9 246 aa16.78■□□□□ 0.28
VCX3B-201ENST00000381029 HDAC6Q9UBN7 1215 aa16.78■□□□□ 0.28
VCX3B-201ENST00000381029 K7ELQ4 463 aaPredicted RBP16.77■□□□□ 0.28
VCX3B-201ENST00000381029 MAGEA10P43363 369 aaPredicted RBP16.77■□□□□ 0.28
VCX3B-201ENST00000381029 ZNF746Q6NUN9 644 aaPredicted RBP16.77■□□□□ 0.28
VCX3B-201ENST00000381029 DHX38Q92620 1227 aaKnown RBP16.77■□□□□ 0.28
VCX3B-201ENST00000381029 NOC4LQ9BVI4 516 aaKnown RBP16.77■□□□□ 0.28
VCX3B-201ENST00000381029 TMEM39AQ9NV64 488 aa16.77■□□□□ 0.28
VCX3B-201ENST00000381029 DDX25Q9UHL0 483 aaKnown RBP16.77■□□□□ 0.28
VCX3B-201ENST00000381029 UMODL1Q5DID0 1318 aa16.76■□□□□ 0.27
VCX3B-201ENST00000381029 SUPT20HL2P0C7V6 817 aa16.76■□□□□ 0.27
VCX3B-201ENST00000381029 ATP4AP20648 1035 aa16.76■□□□□ 0.27
VCX3B-201ENST00000381029 UTP14CQ5TAP6 766 aaKnown RBP16.76■□□□□ 0.27
VCX3B-201ENST00000381029 NOSTRINQ8IVI9 506 aa16.76■□□□□ 0.27
VCX3B-201ENST00000381029 CCDC60Q8IWA6 550 aaPredicted RBP16.76■□□□□ 0.27
VCX3B-201ENST00000381029 AFAP1L1Q8TED9 768 aa16.76■□□□□ 0.27
VCX3B-201ENST00000381029 INTS4Q96HW7 963 aaKnown RBP16.76■□□□□ 0.27
VCX3B-201ENST00000381029 VAV3Q9UKW4 847 aa16.76■□□□□ 0.27
VCX3B-201ENST00000381029 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.76■□□□□ 0.27
VCX3B-201ENST00000381029 LAMA3Q16787 3333 aa16.76■□□□□ 0.27
VCX3B-201ENST00000381029 DDX39AO00148 427 aaKnown RBP16.75■□□□□ 0.27
VCX3B-201ENST00000381029 TBX3O15119 743 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 CCNT1O60563 726 aaKnown RBP16.75■□□□□ 0.27
VCX3B-201ENST00000381029 TIMP1P01033 207 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 SMIM10L2AP0DMW4 78 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 SMIM10L2BP0DMW5 78 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 CYP2C9P11712 490 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 BMP8BP34820 402 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 TOB1P50616 345 aaPredicted RBP16.75■□□□□ 0.27
VCX3B-201ENST00000381029 ZNF200P98182 395 aaPredicted RBP16.75■□□□□ 0.27
VCX3B-201ENST00000381029 KRT76Q01546 638 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 RBL2Q08999 1139 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 SPIRE1Q08AE8 756 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 TRIM71Q2Q1W2 868 aaKnown RBP16.75■□□□□ 0.27
VCX3B-201ENST00000381029 PLPPR4Q7Z2D5 763 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 WNT8BQ93098 351 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 MTMR9Q96QG7 549 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 WNT8AQ9H1J5 351 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 UNC45AQ9H3U1 944 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 SMARCAD1Q9H4L7 1026 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 PRDM5Q9NQX1 630 aaPredicted RBP16.75■□□□□ 0.27
VCX3B-201ENST00000381029 SMC3Q9UQE7 1217 aa16.75■□□□□ 0.27
VCX3B-201ENST00000381029 TRIOBPQ9H2D6 2365 aa16.74■□□□□ 0.27
VCX3B-201ENST00000381029 TLR3O15455 904 aaKnown RBP16.74■□□□□ 0.27
VCX3B-201ENST00000381029 SAFBQ15424 915 aaKnown RBP eCLIP16.74■□□□□ 0.27
VCX3B-201ENST00000381029 FAM47CQ5HY64 1035 aa16.74■□□□□ 0.27
VCX3B-201ENST00000381029 LRCH2Q5VUJ6 765 aa16.74■□□□□ 0.27
VCX3B-201ENST00000381029 SMAP1Q8IYB5 467 aaPredicted RBP16.74■□□□□ 0.27
VCX3B-201ENST00000381029 BADQ92934 168 aa16.74■□□□□ 0.27
VCX3B-201ENST00000381029 FAM20AQ96MK3 541 aa16.74■□□□□ 0.27
VCX3B-201ENST00000381029 NAP1L4Q99733 375 aaKnown RBP16.74■□□□□ 0.27
VCX3B-201ENST00000381029 ERAP1Q9NZ08 941 aa16.74■□□□□ 0.27
VCX3B-201ENST00000381029 ZNF215Q9UL58 517 aaPredicted RBP16.74■□□□□ 0.27
VCX3B-201ENST00000381029 KIF3AQ9Y496 699 aa16.74■□□□□ 0.27
VCX3B-201ENST00000381029 MAFBQ9Y5Q3 323 aaPredicted RBP16.74■□□□□ 0.27
VCX3B-201ENST00000381029 GAS7O60861 476 aa16.73■□□□□ 0.27
VCX3B-201ENST00000381029 CYP2C18P33260 490 aa16.73■□□□□ 0.27
VCX3B-201ENST00000381029 EPHB4P54760 987 aa16.73■□□□□ 0.27
VCX3B-201ENST00000381029 MDM2Q00987 491 aaPredicted RBP16.73■□□□□ 0.27
VCX3B-201ENST00000381029 PPP2R5CQ13362 524 aa16.73■□□□□ 0.27
VCX3B-201ENST00000381029 PLCB4Q15147 1175 aa16.73■□□□□ 0.27
VCX3B-201ENST00000381029 PTGISQ16647 500 aa16.73■□□□□ 0.27
VCX3B-201ENST00000381029 MARCH8Q5T0T0 291 aa16.73■□□□□ 0.27
VCX3B-201ENST00000381029 TRAF7Q6Q0C0 670 aa16.73■□□□□ 0.27
VCX3B-201ENST00000381029 SERINC5Q86VE9 423 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms