RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 FAM228AQ86W67 206 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 MYOCDQ8IZQ8 938 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 SNX29Q8TEQ0 813 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 TGFBRAP1Q8WUH2 860 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 HAS1Q92839 578 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 JPH2Q9BR39 696 aaPredicted RBP10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 LZTS2Q9BRK4 669 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 AP1M1Q9BXS5 423 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 KCTD10Q9H3F6 313 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 NPHP3-ACAD11A0A0J9YXS1 232 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 TRAF5O00463 557 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 KCNK3O14649 394 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 TRAPPC3O43617 180 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 ITGA4P13612 1032 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 GNA11P29992 359 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 SMTNP53814 917 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 MARSP56192 900 aaKnown RBP10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 RNF187Q5TA31 235 aaPredicted RBP10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 DZIP1Q86YF9 867 aaKnown RBP10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 CXorf56Q9H5V9 222 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 NENFQ9UMX5 172 aa10.28□□□□□ -0.76
NHLRC3-202ENST00000379600 USP17L5A8MUK1 530 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 BTNL10A8MVZ5 291 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 CES2O00748 559 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 KIF4AO95239 1232 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 PSMD2Q13200 908 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 MAPKAPK5Q8IW41 473 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 ZC3H3Q8IXZ2 948 aaKnown RBP10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 COA7Q96BR5 231 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 SLC40A1Q9NP59 571 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 AJAP1Q9UKB5 411 aaPredicted RBP10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 USP11P51784 963 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 RPS8P62241 208 aaKnown RBP10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 CACNB1Q02641 598 aaPredicted RBP10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 ORC2Q13416 577 aaPredicted RBP10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 PDIA5Q14554 519 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 CCDC40Q4G0X9 1142 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 NELFCDQ8IXH7 590 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 ZNF444Q8N0Y2 327 aaPredicted RBP10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 CCDC24Q8N4L8 307 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 EIF1ADQ8N9N8 165 aaKnown RBP10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 OLIG1Q8TAK6 271 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 RBM46Q8TBY0 533 aaKnown RBP10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 KLC4Q9NSK0 619 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 ESYT2A0FGR8 921 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 KLHL30Q0D2K2 578 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 PLCB4Q15147 1175 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 SLC10A5Q5PT55 438 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 TBC1D9BQ66K14 1250 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 BICDL1Q6ZP65 573 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 ACTRT1Q8TDG2 376 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 SCFD1Q8WVM8 642 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 CEP95Q96GE4 821 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 TSG101Q99816 390 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 DDX47Q9H0S4 455 aaKnown RBP10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 NUCKS1Q9H1E3 243 aaKnown RBP10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 FBXL5Q9UKA1 691 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 LEMD3Q9Y2U8 911 aa10.27□□□□□ -0.77
NHLRC3-202ENST00000379600 TNRC6CQ9HCJ0 1690 aaKnown RBP10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 GMNCA6NCL1 334 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 H0YHG0 523 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 SART1O43290 800 aaKnown RBP10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 MAP2K2P36507 400 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 NOVP48745 357 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 CDK8P49336 464 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 HSPA2P54652 639 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 TNNC1P63316 161 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 MICALCLQ6ZW33 695 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 METTL13Q8N6R0 699 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 CENPHQ9H3R5 247 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 RIOX1Q9H6W3 641 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 PANK4Q9NVE7 773 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 STXBP5LQ9Y2K9 1186 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 COL24A1Q17RW2 1714 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 FRMPD2Q68DX3 1309 aaPredicted RBP10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 C5orf60A6NFR6 353 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 GCOM1H8Y6P7 765 aaPredicted RBP10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 PPP1R11O60927 126 aaPredicted RBP10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 MYZAPP0CAP1 466 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 HLTFQ14527 1009 aaKnown RBP eCLIP10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 CLEC4GQ6UXB4 293 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 CDK5RAP3Q96JB5 506 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 CEP63Q96MT8 703 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 EYA3Q99504 573 aa10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 NOC2LQ9Y3T9 749 aaKnown RBP10.26□□□□□ -0.77
NHLRC3-202ENST00000379600 A0A0G2JS52 829 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 PAEPP09466 180 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 SLC9A1P19634 815 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 TM4SF1P30408 202 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 USP8P40818 1118 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 CASP5P51878 434 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 CUL1Q13616 776 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 RPS6KA1Q15418 735 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 ASIC2Q16515 512 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 ANKRD20A8PQ5CZ79 823 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 FAM26FQ5R3K3 315 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 C16orf86Q6ZW13 317 aa10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.25□□□□□ -0.77
NHLRC3-202ENST00000379600 RAPGEF5Q92565 580 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms