RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 RASIP1Q5U651 963 aa17.62■□□□□ 0.41
RGP1-201ENST00000378078 ARHGAP25P42331 645 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 PHLDB3Q6NSJ2 640 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 YAF2Q8IY57 180 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 THNSL1Q8IYQ7 743 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 GOLGA5Q8TBA6 731 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 NACC1Q96RE7 527 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 SMYD3Q9H7B4 428 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 RAD18Q9NS91 495 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 SRP68Q9UHB9 627 aaKnown RBP17.61■□□□□ 0.41
RGP1-201ENST00000378078 IREB2P48200 963 aaKnown RBP17.61■□□□□ 0.41
RGP1-201ENST00000378078 SRPK1Q96SB4 655 aaKnown RBP17.61■□□□□ 0.41
RGP1-201ENST00000378078 POLR3CQ9BUI4 534 aaPredicted RBP17.61■□□□□ 0.41
RGP1-201ENST00000378078 PRKAB2O43741 272 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 SNX2O60749 519 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 INTS4Q96HW7 963 aaKnown RBP17.61■□□□□ 0.41
RGP1-201ENST00000378078 SERPINB2P05120 415 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 SYDE2Q5VT97 1194 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.61■□□□□ 0.41
RGP1-201ENST00000378078 OR8K1Q8NGG5 319 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 B4GALNT2Q8NHY0 566 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 PIGOQ8TEQ8 1089 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 FAF2Q96CS3 445 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 EEF1DP29692 281 aaKnown RBP17.61■□□□□ 0.41
RGP1-201ENST00000378078 RECQLP46063 649 aaPredicted RBP17.61■□□□□ 0.41
RGP1-201ENST00000378078 ATXN7L3BQ96GX2 97 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 MSTO1Q9BUK6 570 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 CYP27A1Q02318 531 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 FSD1LQ9BXM9 530 aa17.61■□□□□ 0.41
RGP1-201ENST00000378078 TWF2Q6IBS0 349 aaKnown RBP17.6■□□□□ 0.41
RGP1-201ENST00000378078 HEY1Q9Y5J3 304 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 EIF4E1BA6NMX2 242 aaKnown RBP17.6■□□□□ 0.41
RGP1-201ENST00000378078 HIP1RO75146 1068 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 CENPAP49450 140 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 PTK2BQ14289 1009 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 THEM5Q8N1Q8 247 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 AGR3Q8TD06 166 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 KIF17Q9P2E2 1029 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 IMPACTQ9P2X3 320 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 PPP2R2CQ9Y2T4 447 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 SOX11P35716 441 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 WHAMMP3Q1A5X7 153 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 NUDCD3Q8IVD9 361 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 TBCKQ8TEA7 893 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 GTSE1Q9NYZ3 720 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 DNMBPQ6XZF7 1577 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 YEATS2Q9ULM3 1422 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 SYTL2Q9HCH5 934 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 RAVER2Q9HCJ3 691 aaKnown RBP17.6■□□□□ 0.41
RGP1-201ENST00000378078 NDFIP2Q9NV92 336 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 FGAP02671 866 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 MIS12Q9H081 205 aa17.6■□□□□ 0.41
RGP1-201ENST00000378078 MED7O43513 233 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 CLCN1P35523 988 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 PEX3P56589 373 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 RBL2Q08999 1139 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 THEMIS2Q5TEJ8 643 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 TESK2Q96S53 571 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 EPB41L5Q9HCM4 733 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 LARSQ9P2J5 1176 aaKnown RBP17.59■□□□□ 0.41
RGP1-201ENST00000378078 ADD3Q9UEY8 706 aaKnown RBP17.59■□□□□ 0.41
RGP1-201ENST00000378078 MED23Q9ULK4 1368 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 FAM196BA6NMK8 535 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 FAM26FQ5R3K3 315 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 HPCAL4Q9UM19 191 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 DNAJC6O75061 913 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 TPCN1Q9ULQ1 816 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 SGSM2O43147 1006 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 AFPP02771 609 aaKnown RBP17.59■□□□□ 0.41
RGP1-201ENST00000378078 PSMA2P25787 234 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 RFX8Q6ZV50 586 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 CATSPER4Q7RTX7 472 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 C2orf69Q8N8R5 385 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 ZBTB38Q8NAP3 1195 aaPredicted RBP17.59■□□□□ 0.41
RGP1-201ENST00000378078 HOMER3Q9NSC5 361 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 LRRD1A4D1F6 860 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 PYGLP06737 847 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 IFT88Q13099 833 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 TAS2R42Q7RTR8 314 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 TRIM4Q9C037 500 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 GOLGA8KD6RF30 607 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 MAP3K7O43318 606 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 DDHD2O94830 711 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 ATP6V0A1Q93050 837 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 CARD14Q9BXL6 1004 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 CASS4Q9NQ75 786 aa17.59■□□□□ 0.41
RGP1-201ENST00000378078 SOS2Q07890 1332 aaPredicted RBP17.58■□□□□ 0.41
RGP1-201ENST00000378078 DFFAO00273 331 aa17.58■□□□□ 0.41
RGP1-201ENST00000378078 CASP14P31944 242 aa17.58■□□□□ 0.41
RGP1-201ENST00000378078 POU5F1BQ06416 359 aa17.58■□□□□ 0.41
RGP1-201ENST00000378078 ZSCAN32Q9NX65 697 aa17.58■□□□□ 0.41
RGP1-201ENST00000378078 EFCAB8A8MWE9 144 aa17.58■□□□□ 0.4
RGP1-201ENST00000378078 E5RI56 91 aa17.58■□□□□ 0.4
RGP1-201ENST00000378078 TLR7Q9NYK1 1049 aaKnown RBP17.58■□□□□ 0.4
RGP1-201ENST00000378078 TOP2BQ02880 1626 aa17.58■□□□□ 0.4
RGP1-201ENST00000378078 UBA6A0AVT1 1052 aaPredicted RBP17.58■□□□□ 0.4
RGP1-201ENST00000378078 EFCAB13Q8IY85 973 aa17.58■□□□□ 0.4
RGP1-201ENST00000378078 NGRNQ9NPE2 291 aaKnown RBP17.58■□□□□ 0.4
RGP1-201ENST00000378078 KCNG1Q9UIX4 513 aa17.58■□□□□ 0.4
RGP1-201ENST00000378078 UHRF1BP1Q6BDS2 1440 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms