RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 PACSIN2Q9UNF0 486 aaPredicted RBP13.2□□□□□ -0.3
TMEM38B-202ENST00000374692 RIPK3Q9Y572 518 aa13.2□□□□□ -0.3
TMEM38B-202ENST00000374692 LRRC53A6NM62 1247 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 LGALS16A8MUM7 142 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 BACH1O14867 736 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 ZNF185O15231 689 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 PHACTR2O75167 634 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 GFPT1Q06210 699 aaPredicted RBP13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 HAUS3Q68CZ6 603 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 NEK11Q8NG66 645 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 CCDC127Q96BQ5 260 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 COL20A1Q9P218 1284 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 IPO5O00410 1097 aaKnown RBP13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 NCK2O43639 380 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 LRRN2O75325 713 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 PRPHP41219 470 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 SPA17Q15506 151 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 CYP26C1Q6V0L0 522 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 LACRTQ9GZZ8 138 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 EHD4Q9H223 541 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 ZNF541Q9H0D2 1346 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 SBF2Q86WG5 1849 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 ARHGEF35A5YM69 484 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 RPS6P62753 249 aaKnown RBP13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 ARHGEF16Q5VV41 709 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 MIER3Q7Z3K6 550 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 ZNF397Q8NF99 534 aaPredicted RBP13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 RMDN3Q96TC7 470 aa13.19□□□□□ -0.3
TMEM38B-202ENST00000374692 TERF1P54274 439 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 BAATQ14032 418 aaPredicted RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 SNRNP48Q6IEG0 339 aaKnown RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 PHLDB2Q86SQ0 1253 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 LXNQ9BS40 222 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 HERC5Q9UII4 1024 aaKnown RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 TMX2Q9Y320 296 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 HYOU1Q9Y4L1 999 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 DDX60LQ5H9U9 1706 aaKnown RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 RRP9O43818 475 aaKnown RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 NDUFA10O95299 355 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 EIF4A3P38919 411 aaKnown RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 NOP2P46087 812 aaKnown RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 TRIM65Q6PJ69 517 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 GADL1Q6ZQY3 521 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 C7orf25Q9BPX7 421 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 NHEJ1Q9H9Q4 299 aaPredicted RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 ECM29Q5VYK3 1845 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 SLC9A1P19634 815 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 TBX2Q13207 712 aaPredicted RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 ARSHQ5FYA8 562 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 FAM102BQ5T8I3 360 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 SEPT14Q6ZU15 432 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 GSPT2Q8IYD1 628 aaKnown RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 SUGCTQ9HAC7 445 aa13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 WRAP73Q9P2S5 460 aaPredicted RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 LIMA1Q9UHB6 759 aaKnown RBP13.18□□□□□ -0.3
TMEM38B-202ENST00000374692 ESYT2A0FGR8 921 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 MOCS3O95396 460 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 SSTR3P32745 418 aaPredicted RBP13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 DNM2P50570 870 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 DHTKD1Q96HY7 919 aaPredicted RBP13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 ADAMTS1Q9UHI8 967 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 CNTNAP1P78357 1384 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 RCCD1A6NED2 376 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 ADM5C9JUS6 153 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 VCAM1P19320 739 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 VWA3BQ502W6 1294 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 FAM178BQ8IXR5 827 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 SCFD1Q8WVM8 642 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 NT5C3AQ9H0P0 336 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 PDCL3Q9H2J4 239 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 UNC45AQ9H3U1 944 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 MRPL11Q9Y3B7 192 aaKnown RBP13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 NAV1Q8NEY1 1877 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 TNIP1Q15025 636 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 LMBRD2Q68DH5 695 aaPredicted RBP13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 CYFIP1Q7L576 1253 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 FAM114A1Q8IWE2 563 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 KCNH7Q9NS40 1196 aa13.17□□□□□ -0.3
TMEM38B-202ENST00000374692 CTAGE9A4FU28 777 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 ERICH4A6NGS2 130 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 K7ENM7 598 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 CETN3O15182 167 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 ATP9AO75110 1047 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 ABCB4P21439 1286 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 MARK3P27448 753 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 GYS2P54840 703 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 PPP4R3AQ6IN85 833 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 DNAJC19Q96DA6 116 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 STK17AQ9UEE5 414 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 SPATA31C1P0DKV0 1188 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 TNNT3P45378 269 aaPredicted RBP13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 PRELPP51888 382 aa13.16□□□□□ -0.3
TMEM38B-202ENST00000374692 MKRN4PQ13434 485 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms