RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 SPZ1Q9BXG8 430 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 HAUS4Q9H6D7 363 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 XPNPEP3Q9NQH7 507 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 HERC5Q9UII4 1024 aaKnown RBP6.83□□□□□ -1.32
PTPN3-202ENST00000374541 TMEM131LA2VDJ0 1609 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 RGS12O14924 1447 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 SUN1O94901 812 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 VEGFBP49765 207 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 PHEXP78562 749 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 TNFAIP2Q03169 654 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 TNNI3KQ59H18 835 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 FAM83BQ5T0W9 1011 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 SEPT8Q92599 483 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 ALKQ9UM73 1620 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 KIAA1210Q9ULL0 1709 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 H0YCG3 227 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 INO80B-WBP1J3KQ70 363 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 OATP04181 439 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 C8orf34Q49A92 452 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 CCDC184Q52MB2 194 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 ADAT2Q7Z6V5 191 aaKnown RBP6.83□□□□□ -1.32
PTPN3-202ENST00000374541 LRGUKQ96M69 825 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 RNF146Q9NTX7 359 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 ANKFY1Q9P2R3 1169 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 POLRMTO00411 1230 aaKnown RBP6.83□□□□□ -1.32
PTPN3-202ENST00000374541 SART1O43290 800 aaKnown RBP6.83□□□□□ -1.32
PTPN3-202ENST00000374541 TLL1O43897 1013 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 KRT9P35527 623 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 LMNB2Q03252 620 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 TRIML1Q8N9V2 468 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 GIMAP8Q8ND71 665 aaPredicted RBP6.83□□□□□ -1.32
PTPN3-202ENST00000374541 CFAP61Q8NHU2 1237 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 NACC1Q96RE7 527 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 MEIS3Q99687 375 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 NT5C3AQ9H0P0 336 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 EPS15L1Q9UBC2 864 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 FEM1BQ9UK73 627 aa6.83□□□□□ -1.32
PTPN3-202ENST00000374541 MRPL50Q8N5N7 158 aaKnown RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 CCHCR1Q8TD31 782 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 SDR42E1Q8WUS8 393 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 DPF2Q92785 391 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 SPATA33Q96N06 139 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 MXD3Q9BW11 206 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 IFIH1Q9BYX4 1025 aaKnown RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 ACTR5Q9H9F9 607 aaPredicted RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 XAB2Q9HCS7 855 aaKnown RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 MYO1AQ9UBC5 1043 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 PCDHB9Q9Y5E1 797 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 CDK12Q9NYV4 1490 aaPredicted RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 VWA3AA6NCI4 1184 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 RPS6KB1P23443 525 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 VEPH1Q14D04 833 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 PPP2R2DQ66LE6 453 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 PPANQ9NQ55 473 aaKnown RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 RAB20Q9NX57 234 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 DDX41Q9UJV9 622 aaKnown RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 SCINQ9Y6U3 715 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 KDM3AQ9Y4C1 1321 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 TXNP10599 105 aaKnown RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 PAN2Q504Q3 1202 aaKnown RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 SYDE2Q5VT97 1194 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 KLHL7Q8IXQ5 586 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 PALM2Q8IXS6 379 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 SCYL3Q8IZE3 742 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 CDKL2Q92772 493 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 SYMPKQ92797 1274 aaKnown RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 TMEM169Q96HH4 297 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 KRT12Q99456 494 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 ORC6Q9Y5N6 252 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 KPNA2P52292 529 aaKnown RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 HADHQ16836 314 aaKnown RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 LONRF2Q1L5Z9 754 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 SH3TC2Q8TF17 1288 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 KIFC3Q9BVG8 833 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 MROH7Q68CQ1 1323 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 IBTKQ9P2D0 1353 aaPredicted RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 LRRIQ4A6NIV6 560 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 CHMLP26374 656 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 IL9RQ01113 521 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 XKR9Q5GH70 373 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 FAM102BQ5T8I3 360 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 CCDC13Q8IYE1 715 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 NRBF2Q96F24 287 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 DBNDD2Q9BQY9 259 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 IPO11Q9UI26 975 aaKnown RBP6.82□□□□□ -1.32
PTPN3-202ENST00000374541 ANGPTL3Q9Y5C1 460 aa6.82□□□□□ -1.32
PTPN3-202ENST00000374541 CD163L1Q9NR16 1453 aa6.81□□□□□ -1.32
PTPN3-202ENST00000374541 CTNND1O60716 968 aaKnown RBP6.81□□□□□ -1.32
PTPN3-202ENST00000374541 EIF2AK2P19525 551 aaKnown RBP6.81□□□□□ -1.32
PTPN3-202ENST00000374541 PPIGQ13427 754 aaKnown RBP eCLIP6.81□□□□□ -1.323e-7■■■■■ 28.4
PTPN3-202ENST00000374541 LETM2Q2VYF4 491 aa6.81□□□□□ -1.32
PTPN3-202ENST00000374541 RNF219Q5W0B1 726 aaPredicted RBP6.81□□□□□ -1.32
PTPN3-202ENST00000374541 JADE1Q6IE81 842 aa6.81□□□□□ -1.32
PTPN3-202ENST00000374541 LRRC2Q9BYS8 371 aa6.81□□□□□ -1.32
PTPN3-202ENST00000374541 VPS16Q9H269 839 aa6.81□□□□□ -1.32
PTPN3-202ENST00000374541 PASKQ96RG2 1323 aa6.81□□□□□ -1.32
PTPN3-202ENST00000374541 GPR25O00155 361 aa6.81□□□□□ -1.32
PTPN3-202ENST00000374541 ZNF500O60304 480 aaPredicted RBP6.81□□□□□ -1.32
PTPN3-202ENST00000374541 ALDH7A1P49419 539 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms