RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 RASSF7Q02833 373 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 CTTNQ14247 550 aaKnown RBP15.51■□□□□ 0.07
TRAF1-201ENST00000373887 GRAMD1CQ8IYS0 662 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 TFAMQ00059 246 aaKnown RBP15.5■□□□□ 0.07
TRAF1-201ENST00000373887 NR5A1Q13285 461 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 MESDQ14696 234 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 TMED2Q15363 201 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 FAM133BQ5BKY9 247 aaKnown RBP15.5■□□□□ 0.07
TRAF1-201ENST00000373887 FAM26FQ5R3K3 315 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 UBN1Q9NPG3 1134 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 POLIQ9UNA4 740 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 TMTC3Q6ZXV5 915 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 TRMT10CQ7L0Y3 403 aaKnown RBP15.5■□□□□ 0.07
TRAF1-201ENST00000373887 C7orf31Q8N865 590 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 ZNF653Q96CK0 615 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 METTL14Q9HCE5 456 aaKnown RBP15.5■□□□□ 0.07
TRAF1-201ENST00000373887 PASKQ96RG2 1323 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 SEC31AO94979 1220 aaKnown RBP15.5■□□□□ 0.07
TRAF1-201ENST00000373887 MYL7Q01449 175 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 EHHADHQ08426 723 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 EPHA10Q5JZY3 1008 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 GALNT17Q6IS24 598 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 RMDN2Q96LZ7 410 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 NFX1Q12986 1120 aaKnown RBP15.5■□□□□ 0.07
TRAF1-201ENST00000373887 CCDC51Q96ER9 411 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 ANKRD36BP1Q96IX9 119 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 GPR108Q9NPR9 543 aa15.5■□□□□ 0.07
TRAF1-201ENST00000373887 ZMYND10O75800 440 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 LLGL1Q15334 1064 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 RNF207Q6ZRF8 634 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 ACTN1P12814 892 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 XPAP23025 273 aaPredicted RBP15.49■□□□□ 0.07
TRAF1-201ENST00000373887 INTS9Q9NV88 658 aaKnown RBP15.49■□□□□ 0.07
TRAF1-201ENST00000373887 EPS15L1Q9UBC2 864 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 NXF1Q9UBU9 619 aaKnown RBP15.49■□□□□ 0.07
TRAF1-201ENST00000373887 ENC1O14682 589 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 NMT2O60551 498 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 IL9RQ01113 521 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 GOLGA8FQ08AF8 430 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 GOLGA8DPQ0D2H9 430 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 TTC30AQ86WT1 665 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 ZNF668Q96K58 619 aaPredicted RBP15.49■□□□□ 0.07
TRAF1-201ENST00000373887 ZNF215Q9UL58 517 aaPredicted RBP15.49■□□□□ 0.07
TRAF1-201ENST00000373887 GOLGA8CPA6NN73 597 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 SUN1O94901 812 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 PDXDC2PQ6P474 469 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 SCARA5Q6ZMJ2 495 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 RSRC2Q7L4I2 434 aaKnown RBP15.49■□□□□ 0.07
TRAF1-201ENST00000373887 CARMIL3Q8ND23 1372 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 DYNLT1P63172 113 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 SLC44A5Q8NCS7 719 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 MAP4K1Q92918 833 aa15.49■□□□□ 0.07
TRAF1-201ENST00000373887 USP17L5A8MUK1 530 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 STK25O00506 426 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 TCP11Q8WWU5 503 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 LARP4BQ92615 738 aaKnown RBP15.48■□□□□ 0.07
TRAF1-201ENST00000373887 ZMAT2Q96NC0 199 aaKnown RBP15.48■□□□□ 0.07
TRAF1-201ENST00000373887 MYCBPQ99417 103 aaPredicted RBP15.48■□□□□ 0.07
TRAF1-201ENST00000373887 SNX25Q9H3E2 840 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 THEGQ9P2T0 379 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 SFMBT1Q9UHJ3 866 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 SYNMO15061 1565 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 DDIT3P35638 169 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 SH3BGRP55822 239 aaPredicted RBP15.48■□□□□ 0.07
TRAF1-201ENST00000373887 ZBTB17Q13105 803 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 CCDC197Q8NCU1 140 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 CEP19Q96LK0 163 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 LMBRD1Q9NUN5 540 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 TNS3Q68CZ2 1445 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 A0A087WWV3 80 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 H0YCG3 227 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 PLEKHA8P1O95397 391 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 CYP19A1P11511 503 aaPredicted RBP15.48■□□□□ 0.07
TRAF1-201ENST00000373887 TMEM259Q4ZIN3 620 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 SFI1A8K8P3 1242 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 RNF8O76064 485 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 ATP6V1E1P36543 226 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 ZNF445P59923 1031 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 METTL23Q86XA0 190 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 GDAP1Q8TB36 358 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 KIAA1468Q9P260 1216 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 PNMA2Q9UL42 364 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 INPP5FQ9Y2H2 1132 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 TOM1L1O75674 476 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 EEF1DP29692 281 aaKnown RBP15.48■□□□□ 0.07
TRAF1-201ENST00000373887 NSFP46459 744 aaKnown RBP15.48■□□□□ 0.07
TRAF1-201ENST00000373887 CFAP36Q96G28 342 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 AIFM3Q96NN9 605 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 CD209Q9NNX6 404 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 PNMA3Q9UL41 463 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 MTMR6Q9Y217 621 aa15.48■□□□□ 0.07
TRAF1-201ENST00000373887 GOLGA8IPA6NC78 632 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 GOLGA8JA6NMD2 632 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 PCP11498 1178 aaKnown RBP15.47■□□□□ 0.07
TRAF1-201ENST00000373887 CLEC4GQ6UXB4 293 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.47■□□□□ 0.07
TRAF1-201ENST00000373887 LONP1P36776 959 aaKnown RBP15.47■□□□□ 0.07
TRAF1-201ENST00000373887 HSP90AA5PQ58FG0 334 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 GOLGA5Q8TBA6 731 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 ALKBH8Q96BT7 664 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms