RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 TM6SF1Q9BZW5 370 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 NT5C3AQ9H0P0 336 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 USP15Q9Y4E8 981 aaPredicted RBP7.55□□□□□ -1.2
CSMD2-206ENST00000373388 A0A0G2JND7 137 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 EHHADHQ08426 723 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 LRIG3Q6UXM1 1119 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 NEK8Q86SG6 692 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 PDLIM2Q96JY6 352 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 SCYL1Q96KG9 808 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 FAM161BQ96MY7 647 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 PRR23BQ6ZRT6 265 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 STKLD1Q8NE28 680 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 IL17RAQ96F46 866 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 B3GALT6Q96L58 329 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 CNPY3Q9BT09 278 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 DCTPP1Q9H773 170 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 VCPKMTQ9H867 229 aa7.55□□□□□ -1.2
CSMD2-206ENST00000373388 GSTO1P78417 241 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 CCDC153Q494R4 210 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 RABGAP1LQ5R372 815 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 LRRC8EQ6NSJ5 796 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 GPT2Q8TD30 523 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 CUEDC2Q9H467 287 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 TMOD4Q9NZQ9 345 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 RIPPLY1Q0D2K3 151 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 SIX6OS1Q8N1H7 587 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 SNX25Q9H3E2 840 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 ICE1Q9Y2F5 2266 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 TTC21BQ7Z4L5 1316 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 IGBP1P78318 339 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 TMED2Q15363 201 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 CYB5D1Q6P9G0 228 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 SNRNP27Q8WVK2 155 aaKnown RBP7.54□□□□□ -1.2
CSMD2-206ENST00000373388 EME1Q96AY2 570 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 ELAC2Q9BQ52 826 aaKnown RBP7.54□□□□□ -1.2
CSMD2-206ENST00000373388 AASDHQ4L235 1098 aaPredicted RBP7.54□□□□□ -1.2
CSMD2-206ENST00000373388 VSTM4Q8IW00 320 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 PDIK1LQ8N165 341 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 TMEM87AQ8NBN3 555 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 GDAP1Q8TB36 358 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 BPIFA3Q9BQP9 254 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 ANKIB1Q9P2G1 1089 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 CIDEBQ9UHD4 219 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 EVPLLA8MZ36 301 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 RPS6KB1P23443 525 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 NOD2Q9HC29 1040 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 RSL24D1Q9UHA3 163 aaKnown RBP7.54□□□□□ -1.2
CSMD2-206ENST00000373388 MAP3K2Q9Y2U5 619 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 L3MBTL1Q9Y468 752 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 SPDYE3A6NKU9 549 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 YWHAGP61981 247 aaKnown RBP eCLIP7.54□□□□□ -1.2
CSMD2-206ENST00000373388 FAM207AQ9NSI2 230 aaPredicted RBP7.54□□□□□ -1.2
CSMD2-206ENST00000373388 TMA7Q9Y2S6 64 aaKnown RBP7.54□□□□□ -1.2
CSMD2-206ENST00000373388 EMILIN1Q9Y6C2 1016 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 DCAF8L1A6NGE4 600 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 FBLN1P23142 703 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 GPTP24298 496 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 SCRN1Q12765 414 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 PDAP1Q13442 181 aaKnown RBP7.54□□□□□ -1.2
CSMD2-206ENST00000373388 TCP11X2Q5H9J9 407 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 BTNL9Q6UXG8 535 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.54□□□□□ -1.2
CSMD2-206ENST00000373388 CCDC127Q96BQ5 260 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 KDM5DQ9BY66 1539 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 ATP5J2-PTCD1G3V325 749 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 H2AFZP0C0S5 128 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.54□□□□□ -1.2
CSMD2-206ENST00000373388 GRM1Q13255 1194 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 SWT1Q5T5J6 900 aaKnown RBP7.54□□□□□ -1.2
CSMD2-206ENST00000373388 CCDC149Q6ZUS6 474 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 H2AFVQ71UI9 128 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 OTULINQ96BN8 352 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 ATPIF1Q9UII2 106 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 CHMLP26374 656 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 TTKP33981 857 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 PGM1P36871 562 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 PLEKHM2Q8IWE5 1019 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 RHOBTB2Q9BYZ6 727 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 TIMMDC1Q9NPL8 285 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 CMA1P23946 247 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 SLC40A1Q9NP59 571 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 PRDM11Q9NQV5 511 aa7.54□□□□□ -1.2
CSMD2-206ENST00000373388 PNMA8CA0A1B0GUJ8 204 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 LSM1O15116 133 aaKnown RBP7.53□□□□□ -1.2
CSMD2-206ENST00000373388 STAM2O75886 525 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 PGM3O95394 542 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 CLPTM1O96005 669 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 NLRP11P59045 1033 aaKnown RBP7.53□□□□□ -1.2
CSMD2-206ENST00000373388 DENND6AQ8IWF6 608 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 TMEM87BQ96K49 555 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 KCNK16Q96T55 309 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 NOVA2Q9UNW9 492 aaKnown RBP7.53□□□□□ -1.2
CSMD2-206ENST00000373388 TRIM24O15164 1050 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 PFKFB2O60825 505 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 TP53BP2Q13625 1128 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 LONRF3Q496Y0 759 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 KCNV2Q8TDN2 545 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 POMGNT1Q8WZA1 660 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 CMTM5Q96DZ9 223 aa7.53□□□□□ -1.2
CSMD2-206ENST00000373388 DEPDC7Q96QD5 511 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms