RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 NR1D1P20393 614 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 LONP1P36776 959 aaKnown RBP5.28□□□□□ -1.56
SGIP1-204ENST00000371039 E2F5Q15329 346 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 CYB5D1Q6P9G0 228 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 WASF1Q92558 559 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 RUBCNQ92622 972 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 NSUN4Q96CB9 384 aaKnown RBP5.28□□□□□ -1.56
SGIP1-204ENST00000371039 IFIH1Q9BYX4 1025 aaKnown RBP5.28□□□□□ -1.56
SGIP1-204ENST00000371039 SIX2Q9NPC8 291 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 DCP1AQ9NPI6 582 aaPredicted RBP5.28□□□□□ -1.56
SGIP1-204ENST00000371039 IRAK4Q9NWZ3 460 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 PLAAQ9Y263 795 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 RTL9Q8NET4 1388 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 A0A0G2JS52 829 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 EBAG9O00559 213 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 HEXIM1O94992 359 aaKnown RBP5.28□□□□□ -1.56
SGIP1-204ENST00000371039 ADAMTS2O95450 1211 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 CDC25CP30307 473 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 SCTRP47872 440 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 GUCY2DQ02846 1103 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 MGAT5Q09328 741 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 CCDC15Q0P6D6 951 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 NAB2Q15742 525 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 INF2Q27J81 1249 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 VWA3BQ502W6 1294 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 CDCA2Q69YH5 1023 aaPredicted RBP5.28□□□□□ -1.56
SGIP1-204ENST00000371039 ZDHHC24Q6UX98 284 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 GBP6Q6ZN66 633 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 SMIM5Q71RC9 77 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 CSGALNACT2Q8N6G5 542 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 USP38Q8NB14 1042 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 PHC3Q8NDX5 983 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 L3MBTL3Q96JM7 780 aaPredicted RBP5.28□□□□□ -1.56
SGIP1-204ENST00000371039 CABS1Q96KC9 395 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 NUP58Q9BVL2 599 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 GPR88Q9GZN0 384 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 NDST4Q9H3R1 872 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 A8MUI8 341 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 PHF20L1A8MW92 1017 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 MINDY4BA8MYZ0 360 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 ORC4O43929 436 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 PDE8AO60658 829 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 PARNO95453 639 aaKnown RBP5.28□□□□□ -1.56
SGIP1-204ENST00000371039 ALADP13716 330 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 SLC5A1P13866 664 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 PEX19P40855 299 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 TRAPPC10P48553 1259 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 SLFN11Q7Z7L1 901 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 AMIGO3Q86WK7 504 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 TRIM22Q8IYM9 498 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 DAGLBQ8NCG7 672 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 UTP4Q969X6 686 aaKnown RBP5.28□□□□□ -1.56
SGIP1-204ENST00000371039 FAM84BQ96KN1 310 aaPredicted RBP5.28□□□□□ -1.56
SGIP1-204ENST00000371039 KCTD10Q9H3F6 313 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 GOPCQ9HD26 462 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 SLC39A2Q9NP94 309 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 CEP131Q9UPN4 1083 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 COMMD10Q9Y6G5 202 aa5.28□□□□□ -1.56
SGIP1-204ENST00000371039 MROH5Q6ZUA9 1318 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 USP34Q70CQ2 3546 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 ANKRD18BA2A2Z9 1011 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 USP17L12C9JPN9 530 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 USP17L21D6R901 530 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 NDUFAB1O14561 156 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 KRT86O43790 486 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 PPP1R11O60927 126 aaPredicted RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 SKAP2O75563 359 aaPredicted RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 UPP2O95045 317 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 NOVP48745 357 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 CASP5P51878 434 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 PSMC1P62191 440 aaKnown RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 ELF3P78545 371 aaPredicted RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 CHRNDQ07001 517 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 PTPROQ16827 1216 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 CCDC40Q4G0X9 1142 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 HSP90B2PQ58FF3 399 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 ZNF571Q7Z3V5 609 aaPredicted RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 PIGWQ7Z7B1 504 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 C11orf96Q7Z7L8 435 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 TRIM58Q8NG06 486 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 RNF25Q96BH1 459 aaPredicted RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 DHTKD1Q96HY7 919 aaPredicted RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 KRT12Q99456 494 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 CDCA7Q9BWT1 371 aaPredicted RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 BRIP1Q9BX63 1249 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 EBF2Q9HAK2 575 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 USP21Q9UK80 565 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 RTCBQ9Y3I0 505 aaKnown RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 USP17L3A6NCW0 530 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 USP17L4A6NCW7 530 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 PALM3A6NDB9 673 aaPredicted RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 CAMTA2O94983 1202 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 CREB1P16220 341 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 MAP2K2P36507 400 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 CCNHP51946 323 aaPredicted RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 RNASE9P60153 205 aaKnown RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 MKRN4PQ13434 485 aaPredicted RBP5.27□□□□□ -1.57
SGIP1-204ENST00000371039 BRINP3Q76B58 766 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 USP17L1Q7RTZ2 530 aa5.27□□□□□ -1.57
SGIP1-204ENST00000371039 TMC3Q7Z5M5 1100 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms