RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SCP2P22307 547 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 TNFRSF8P28908 595 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 GNAQP50148 359 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 SIK1P57059 783 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 ASIC2Q16515 512 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 KRT71Q3SY84 523 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 RAPGEF5Q92565 580 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 RAD54LQ92698 747 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 PANK4Q9NVE7 773 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 CEP72Q9P209 647 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 LEMD3Q9Y2U8 911 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 HMGB1P1B2RPK0 211 aaPredicted RBP11.11□□□□□ -0.63
PTPRA-203ENST00000356147 KRIT1O00522 736 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 RPSAP08865 295 aaKnown RBP11.11□□□□□ -0.63
PTPRA-203ENST00000356147 SLURP2P0DP57 97 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 RASA1P20936 1047 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 CDR1P51861 262 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 FKBP3Q00688 224 aaKnown RBP11.11□□□□□ -0.63
PTPRA-203ENST00000356147 NBPF9Q3BBW0 867 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 HERC4Q5GLZ8 1057 aaPredicted RBP11.11□□□□□ -0.63
PTPRA-203ENST00000356147 FAM26FQ5R3K3 315 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 TCERG1LQ5VWI1 586 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 KRT79Q5XKE5 535 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 ZNF571Q7Z3V5 609 aaPredicted RBP11.11□□□□□ -0.63
PTPRA-203ENST00000356147 METTL13Q8N6R0 699 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 WHAMMQ8TF30 809 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 SPAG5Q96R06 1193 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 EYA3Q99504 573 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 IKZF4Q9H2S9 585 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 GGT7Q9UJ14 662 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 ATP8A1Q9Y2Q0 1164 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 ARAP2Q8WZ64 1704 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 KIF4AO95239 1232 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 DCAF17Q5H9S7 520 aaPredicted RBP11.11□□□□□ -0.63
PTPRA-203ENST00000356147 SPTY2D1Q68D10 685 aaPredicted RBP11.11□□□□□ -0.63
PTPRA-203ENST00000356147 DAGLBQ8NCG7 672 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 GIMAP7Q8NHV1 300 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 TBC1D31Q96DN5 1066 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 CEP95Q96GE4 821 aa11.11□□□□□ -0.63
PTPRA-203ENST00000356147 NOC2LQ9Y3T9 749 aaKnown RBP11.11□□□□□ -0.63
PTPRA-203ENST00000356147 H0YGN5 161 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 FGFR1OPO95684 399 aaKnown RBP11.1□□□□□ -0.63
PTPRA-203ENST00000356147 CCDC172P0C7W6 258 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 GNA11P29992 359 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 HSPA9P38646 679 aaKnown RBP11.1□□□□□ -0.63
PTPRA-203ENST00000356147 RPS8P62241 208 aaKnown RBP11.1□□□□□ -0.63
PTPRA-203ENST00000356147 LRRC63Q05C16 580 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 DHX9Q08211 1270 aaKnown RBP11.1□□□□□ -0.63
PTPRA-203ENST00000356147 LLGL1Q15334 1064 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 SBK1Q52WX2 424 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 UBAP2Q5T6F2 1119 aaKnown RBP11.1□□□□□ -0.63
PTPRA-203ENST00000356147 CPLX4Q7Z7G2 160 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 FAM228AQ86W67 206 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 N4BP2L2Q92802 583 aaPredicted RBP11.1□□□□□ -0.63
PTPRA-203ENST00000356147 SEC16BQ96JE7 1060 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 MAGEF1Q9HAY2 307 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 SLAIN2Q9P270 581 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 AJAP1Q9UKB5 411 aaPredicted RBP11.1□□□□□ -0.63
PTPRA-203ENST00000356147 KIAA1024Q9UPX6 916 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 PCDHGC5Q9Y5F6 944 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 NFS1Q9Y697 457 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 A0A1B0GUL6 1792 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 HGSO14964 777 aaPredicted RBP11.1□□□□□ -0.63
PTPRA-203ENST00000356147 KCNQ2O43526 872 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 STAT3P40763 770 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 CASP5P51878 434 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 KCNH2Q12809 1159 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 TMEM266Q2M3C6 531 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 MTMR9Q96QG7 549 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 ISCUQ9H1K1 167 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 SLC12A6Q9UHW9 1150 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 TSKSQ9UJT2 592 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 BCS1LQ9Y276 419 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 ANKRD36CQ5JPF3 1778 aa11.1□□□□□ -0.63
PTPRA-203ENST00000356147 POTEB3A0JP26 581 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 POTECB2RU33 542 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 MEIS1O00470 390 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 CHUKO15111 745 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 RASSF9O75901 435 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 KRT18P05783 430 aaKnown RBP11.09□□□□□ -0.63
PTPRA-203ENST00000356147 SLC16A2P36021 539 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 IFFO1Q0D2I5 559 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 ZNF211Q13398 564 aaPredicted RBP11.09□□□□□ -0.63
PTPRA-203ENST00000356147 ADAM9Q13443 819 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 POTEBQ6S5H4 581 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 C6orf89Q6UWU4 347 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 DNAJC19Q96DA6 116 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 PNMA2Q9UL42 364 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 CASZ1Q86V15 1759 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 SHBGP04278 402 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 LDHBP07195 334 aaKnown RBP11.09□□□□□ -0.63
PTPRA-203ENST00000356147 ABCB4P21439 1286 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 SMTNP53814 917 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 BYSLQ13895 437 aaKnown RBP11.09□□□□□ -0.63
PTPRA-203ENST00000356147 CYB5D1Q6P9G0 228 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 MREGQ8N565 214 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 RUBCNQ92622 972 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 SELENOSQ9BQE4 189 aa11.09□□□□□ -0.63
PTPRA-203ENST00000356147 PLCB1Q9NQ66 1216 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms