RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 GDF11O95390 407 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 SLC17A8Q8NDX2 589 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 ZSCAN10Q96SZ4 725 aaPredicted RBP18.57■□□□□ 0.56
COL27A1-201ENST00000356083 CAPZA2P47755 286 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 TTC23LQ6PF05 361 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 CHMP1BQ7LBR1 199 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 PPP1R36Q96LQ0 422 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 TNRQ92752 1358 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 PLS3P13797 630 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 CTSWP56202 376 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 NEK8Q86SG6 692 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 NGRNQ9NPE2 291 aaKnown RBP18.57■□□□□ 0.56
COL27A1-201ENST00000356083 NDUFB5O43674 189 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 MCF2P10911 925 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 SF3B3Q15393 1217 aaKnown RBP18.57■□□□□ 0.56
COL27A1-201ENST00000356083 PLEKHM2Q8IWE5 1019 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 EGFL8Q99944 293 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 TRPC7Q9HCX4 862 aa18.57■□□□□ 0.56
COL27A1-201ENST00000356083 APOA4P06727 396 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 MFSD4BQ5TF39 518 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 UBA6A0AVT1 1052 aaPredicted RBP18.56■□□□□ 0.56
COL27A1-201ENST00000356083 DDHD2O94830 711 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 ZNF75DP51815 510 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 STAT2P52630 851 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 G2E3Q7L622 706 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 IMPACTQ9P2X3 320 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 ARPP21Q9UBL0 812 aaPredicted RBP18.56■□□□□ 0.56
COL27A1-201ENST00000356083 HEY1Q9Y5J3 304 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 LMNB2Q03252 620 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 PRKCQQ04759 706 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 HSP90AA5PQ58FG0 334 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 CAPN10Q9HC96 672 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 OR52Z1P0C646 297 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 MYBP10242 640 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 AOC3Q16853 763 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 LVRNQ6Q4G3 990 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 IL16Q14005 1332 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 ZNF827Q17R98 1081 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 CC2D2BQ6DHV5 1058 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 EDC3Q96F86 508 aaKnown RBP18.56■□□□□ 0.56
COL27A1-201ENST00000356083 UPF3AQ9H1J1 476 aaKnown RBP18.56■□□□□ 0.56
COL27A1-201ENST00000356083 C19orf44Q9H6X5 657 aa18.56■□□□□ 0.56
COL27A1-201ENST00000356083 SAMSN1Q9NSI8 373 aaKnown RBP18.56■□□□□ 0.56
COL27A1-201ENST00000356083 XPO4Q9C0E2 1151 aaKnown RBP18.56■□□□□ 0.56
COL27A1-201ENST00000356083 RPN1P04843 607 aaKnown RBP18.55■□□□□ 0.56
COL27A1-201ENST00000356083 PTGDRQ13258 359 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 STXBP2Q15833 593 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 ARMCX2Q7L311 632 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 TRAF3IP3Q9Y228 551 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 NPM3O75607 178 aaKnown RBP18.55■□□□□ 0.56
COL27A1-201ENST00000356083 KLHL29Q96CT2 875 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 TRPV6Q9H1D0 765 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 E7EWF7 191 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 MT-ND3P03897 115 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 PLEKHM3Q6ZWE6 761 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 ADCK2Q7Z695 626 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 TRIML1Q8N9V2 468 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 ZNF212Q9UDV6 495 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 AFPP02771 609 aaKnown RBP18.55■□□□□ 0.56
COL27A1-201ENST00000356083 POLE2P56282 527 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 KIAA1755Q5JYT7 1200 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 SUN2Q9UH99 717 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.55■□□□□ 0.56
COL27A1-201ENST00000356083 ENOX1Q8TC92 643 aaKnown RBP18.55■□□□□ 0.56
COL27A1-201ENST00000356083 OSBPL10Q9BXB5 764 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 HYOU1Q9Y4L1 999 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 PRR23AA6NEV1 266 aa18.55■□□□□ 0.56
COL27A1-201ENST00000356083 ENC1O14682 589 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 URGCPQ8TCY9 931 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 ZNF668Q96K58 619 aaPredicted RBP18.54■□□□□ 0.56
COL27A1-201ENST00000356083 YTHDC2Q9H6S0 1430 aaKnown RBP18.54■□□□□ 0.56
COL27A1-201ENST00000356083 GOLGA8MH3BSY2 632 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 KPNA2P52292 529 aaKnown RBP18.54■□□□□ 0.56
COL27A1-201ENST00000356083 KDELC2Q7Z4H8 507 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 TXLNGQ9NUQ3 528 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 TTI1O43156 1089 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 PLTPP55058 493 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 C16orf87Q6PH81 154 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 DNAJC10Q8IXB1 793 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 PAWRQ96IZ0 340 aaKnown RBP18.54■□□□□ 0.56
COL27A1-201ENST00000356083 KLHL8Q9P2G9 620 aaPredicted RBP18.54■□□□□ 0.56
COL27A1-201ENST00000356083 BAZ2BQ9UIF8 2168 aaKnown RBP18.54■□□□□ 0.56
COL27A1-201ENST00000356083 MAN1A2O60476 641 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 CCDC159P0C7I6 412 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 PASD1Q8IV76 773 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 LBHD1Q9BQE6 289 aaPredicted RBP18.54■□□□□ 0.56
COL27A1-201ENST00000356083 ARHGEF37A1IGU5 675 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 RSPH10B2B2RC85 870 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 ZBED1O96006 694 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 RSPH10BP0C881 870 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 NME3Q13232 169 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 ZSCAN26Q16670 478 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 C11orf96Q7Z7L8 435 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 ORAI2Q96SN7 254 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 LGR6Q9HBX8 967 aa18.54■□□□□ 0.56
COL27A1-201ENST00000356083 GFPT2O94808 682 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 SNCBQ16143 134 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 TEX9Q8N6V9 391 aa18.53■□□□□ 0.56
COL27A1-201ENST00000356083 GIMAP4Q9NUV9 329 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms