RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 TPP1O14773 563 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ALDH1A2O94788 518 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CD1EP15812 388 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 GRIA4P48058 902 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 STARD6P59095 220 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 RAC1P63000 192 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CCDC15Q0P6D6 951 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 DCTN1Q14203 1278 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 MDH1BQ5I0G3 518 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 TMEM201Q5SNT2 666 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 AKNAD1Q5T1N1 836 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 SLC35F1Q5T1Q4 408 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 RNF187Q5TA31 235 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 LAPTM4BQ86VI4 370 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 NLRP13Q86W25 1043 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CACNA2D3Q8IZS8 1091 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CMASQ8NFW8 434 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 MRFAP1L1Q96HT8 127 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 PAWRQ96IZ0 340 aaKnown RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 MAGEB10Q96LZ2 347 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CCDC138Q96M89 665 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 MMS19Q96T76 1030 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 SPATA9Q9BWV2 254 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 TWSG1Q9GZX9 223 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 C5AR2Q9P296 337 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 TUBD1Q9UJT1 453 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 TNRQ92752 1358 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CFAP74Q9C0B2 1584 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 A0A1W2PQM1 296 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 BOLA2-SMG1P6H3BVE0 249 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 J3KRW8 73 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 EREGO14944 169 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ORC4O43929 436 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CT47B1P0C2W7 299 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 TNFAIP3P21580 790 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CA8P35219 290 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 SOX10P56693 466 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 PEX6Q13608 980 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 MYBPC3Q14896 1274 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 RTN1Q16799 776 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CCDC38Q502W7 563 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 INTS6LQ5JSJ4 861 aaKnown RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 TXNRD3Q86VQ6 643 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 RASSF3Q86WH2 238 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 SP8Q8IXZ3 490 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CISD2Q8N5K1 135 aaKnown RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ZNF511Q8NB15 262 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ZNF384Q8TF68 577 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ASB12Q8WXK4 309 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 LIN37Q96GY3 246 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 MRPL4Q9BYD3 311 aaKnown RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.54□□□□□ -21e-6■■■■□ 21.2
SMARCAD1-201ENST00000354268 TMEM8AQ9HCN3 771 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 TMEM39AQ9NV64 488 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 DLGAP2Q9P1A6 1054 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ZBTB21Q9ULJ3 1066 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 TNNQ9UQP3 1299 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CNTNAP5Q8WYK1 1306 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 WDR33Q9C0J8 1336 aaKnown RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 FSCN2O14926 492 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 SLC25A17O43808 307 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 USO1O60763 962 aaKnown RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 DDAH2O95865 285 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 PF4P02776 101 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CFHP08603 1231 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 MCM3P25205 808 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 GRB10Q13322 594 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CAMK2GQ13555 558 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 KARSQ15046 597 aaKnown RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 PLCB4Q15147 1175 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 RNF20Q5VTR2 975 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 SCARA3Q6AZY7 606 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 OGFOD3Q6PK18 319 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 USP50Q70EL3 339 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 RSPH3Q86UC2 560 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 NCAPG2Q86XI2 1143 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 UBR7Q8N806 425 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 C1orf127Q8N9H9 656 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 MYRIPQ8NFW9 859 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 OR6P1Q8NGX9 317 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 SLC30A5Q8TAD4 765 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CAGE1Q8TC20 777 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ANKS1AQ92625 1134 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 DPF1Q92782 380 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ZNF622Q969S3 477 aaKnown RBP eCLIP2.54□□□□□ -23e-6■■■□□ 15.6
SMARCAD1-201ENST00000354268 ZC3H10Q96K80 434 aaKnown RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 CAPNS2Q96L46 248 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 PPM1MQ96MI6 270 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 SRPK1Q96SB4 655 aaKnown RBP2.54□□□□□ -2
SMARCAD1-201ENST00000354268 TMEM120AQ9BXJ8 343 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 NYXQ9GZU5 481 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ADAM7Q9H2U9 754 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 PALMDQ9NP74 551 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ADAMTS5Q9UNA0 930 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 PPIP5K1Q6PFW1 1433 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 ABCC10Q5T3U5 1492 aa2.54□□□□□ -2
SMARCAD1-201ENST00000354268 PMS2P1A4D2B8 440 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms