RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 GPR85P60893 370 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 RHDQ02161 417 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 LAPTM5Q13571 262 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 VPS72Q15906 364 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 TOR2AQ5JU69 321 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CXorf57Q6NSI4 855 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CLEC4GQ6UXB4 293 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 IFNL3Q8IZI9 196 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 RNF141Q8WVD5 230 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 TMEM169Q96HH4 297 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 TBCBQ99426 244 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 LRFN3Q9BTN0 628 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CRB3Q9BUF7 120 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 DUSP23Q9BVJ7 150 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 SLC13A1Q9BZW2 595 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 TCF7L1Q9HCS4 588 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 PRDM10Q9NQV6 1147 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 DDX21Q9NR30 783 aaKnown RBP eCLIP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 TOMM22Q9NS69 142 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 PREX1Q8TCU6 1659 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 MEGF6O75095 1541 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 GLI2P10070 1586 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 E2F8A0AVK6 867 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 MEFVO15553 781 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CTNND1O60716 968 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 AGR2O95994 175 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 GSTM1P09488 218 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ELNP15502 786 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 GRK2P25098 689 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 THBS2P35442 1172 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 GRK3P35626 688 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ALDH5A1P51649 535 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 IRF9Q00978 393 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ADCY1Q08828 1119 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 SIM2Q14190 667 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 IFI16Q16666 785 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 RRP12Q5JTH9 1297 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CCDC174Q6PII3 467 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 SUGP1Q8IWZ8 645 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 KIAA1958Q8N8K9 716 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 C2orf69Q8N8R5 385 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 FAM181AQ8N9Y4 354 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 DIS3LQ8TF46 1054 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 KIAA1191Q96A73 305 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 FBXL18Q96ME1 805 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ELAC2Q9BQ52 826 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ORAI3Q9BRQ5 295 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 RNF208Q9H0X6 261 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 POFUT1Q9H488 388 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 AS3MTQ9HBK9 375 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 CABP5Q9NP86 173 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 PRDM11Q9NQV5 511 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 GPR27Q9NS67 375 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 GULP1Q9UBP9 304 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 TELO2Q9Y4R8 837 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 SRCAPQ6ZRS2 3230 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 KRTAP9-6A0A140TA67 174 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ZNF561-AS1K7EIQ3 104 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 SCDO00767 359 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 KPNA5O15131 536 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 NCK2O43639 380 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ITIH2P19823 946 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 ADMP35318 185 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 LTBRP36941 435 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 SEPHS1P49903 392 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 TUSC3Q13454 348 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 FDX2Q6P4F2 183 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 MFSD2AQ8NA29 543 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 TCTN2Q96GX1 697 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 MENTQ9BUN1 341 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 RXFP1Q9HBX9 757 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 GTF2IRD1Q9UHL9 959 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 LIMCH1Q9UPQ0 1083 aa2.07□□□□□ -2.08
BRCA1-202ENST00000354071 DIS3Q9Y2L1 958 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 LAS1LQ9Y4W2 734 aaKnown RBP2.07□□□□□ -2.08
BRCA1-202ENST00000354071 GLB1P16278 677 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 CYP2C19P33261 490 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 IL6STP40189 918 aaPredicted RBP2.06□□□□□ -2.08
BRCA1-202ENST00000354071 PRIM2P49643 509 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 KIF11P52732 1056 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 CDKAL1Q5VV42 579 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.06□□□□□ -2.08
BRCA1-202ENST00000354071 CCDC149Q6ZUS6 474 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 NOSTRINQ8IVI9 506 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 CELF5Q8N6W0 485 aaKnown RBP2.06□□□□□ -2.08
BRCA1-202ENST00000354071 SMG8Q8ND04 991 aaKnown RBP2.06□□□□□ -2.08
BRCA1-202ENST00000354071 EAF2Q96CJ1 260 aaPredicted RBP2.06□□□□□ -2.08
BRCA1-202ENST00000354071 CYP4F12Q9HCS2 524 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 DMRT3Q9NQL9 472 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 VPS45Q9NRW7 570 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 ATG3Q9NT62 314 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 DNAJC28Q9NX36 388 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 RTEL1Q9NZ71 1219 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 PTPN22Q9Y2R2 807 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 C7orf72A4D263 438 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 KLHL33A6NCF5 533 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 LRRC14BA6NHZ5 514 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 PRSS47A8MTI9 375 aa2.06□□□□□ -2.08
BRCA1-202ENST00000354071 F5H423 210 aaPredicted RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms