RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 TRAF3IP3Q9Y228 551 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 ADAMTSL1Q8N6G6 1762 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 RXRBP28702 533 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 TNFRSF8P28908 595 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 EIF6P56537 245 aaKnown RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 CETN1Q12798 172 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 STK4Q13043 487 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 SMIM5Q71RC9 77 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 USP37Q86T82 979 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 SLC16A10Q8TF71 515 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 TAF4BQ92750 862 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 HVCN1Q96D96 273 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 NACC1Q96RE7 527 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 PLIN2Q99541 437 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 LSM14BQ9BX40 385 aaKnown RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 OLFML3Q9NRN5 406 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 FAM198AQ9UFP1 575 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 SIK3Q9Y2K2 1263 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 TMX2Q9Y320 296 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 SRCAPQ6ZRS2 3230 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 SLX4Q8IY92 1834 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 POTEMA6NI47 508 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 F5H6K3 240 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 RAD21O60216 631 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 ZRANB2O95218 330 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNF38-203ENST00000353739 SSBP05455 408 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNF38-203ENST00000353739 FERP16591 822 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 RPS12P25398 132 aaKnown RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 ARHGAP25P42331 645 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 KIF11P52732 1056 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 SLC12A3P55017 1021 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 KLRC3Q07444 240 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 NNTQ13423 1086 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 KNOP1Q1ED39 458 aaKnown RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 SPDYE2Q495Y8 402 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 HERC4Q5GLZ8 1057 aaPredicted RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 FAM182BQ5T319 152 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 GBP6Q6ZN66 633 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 DYMQ7RTS9 669 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 IRF2BP1Q8IU81 584 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 NIM1KQ8IY84 436 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 RDM1Q8NG50 284 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 TBC1D5Q92609 795 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 LPAR1Q92633 364 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 CSRNP1Q96S65 589 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 DEFB129Q9H1M3 183 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 TMEM206Q9H813 350 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 MMRN2Q9H8L6 949 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 DBNDD1Q9H9R9 158 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 AS3MTQ9HBK9 375 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 PSD3Q9NYI0 1048 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 EXOC7Q9UPT5 735 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 MAPK8IP1Q9UQF2 711 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 PCDHB13Q9Y5F0 798 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 H0YCG3 227 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 MAPK13O15264 365 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 PNMA6AP0CW24 399 aaPredicted RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 FCER1AP12319 257 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 XRCC5P13010 732 aaKnown RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 HERVK_113P62684 666 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 PPP2R5AQ15172 486 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 EPHA7Q15375 998 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 SLC15A2Q16348 729 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 PPP2R5EQ16537 467 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 ZCWPW2Q504Y3 356 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 LRRC55Q6ZSA7 311 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 HS2ST1Q7LGA3 356 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 MMGT1Q8N4V1 131 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 ETNPPLQ8TBG4 499 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 FAM71BQ8TC56 605 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 HAS1Q92839 578 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 SLC5A5Q92911 643 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 RIT2Q99578 217 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 SELENOOQ9BVL4 669 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 PARD6BQ9BYG5 372 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 FRMD4BQ9Y2L6 1034 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 WDR46O15213 610 aaKnown RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 P4HA2O15460 535 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 FLOT1O75955 427 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 NDUFB10O96000 172 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 PSMC2P35998 433 aaKnown RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 PMS1P54277 932 aaKnown RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 ADAM9Q13443 819 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 PRR16Q569H4 304 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 KIAA0825Q8IV33 1275 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 TTLL6Q8N841 843 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 TMEM174Q8WUU8 243 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 DNAJC19Q96DA6 116 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 PBKQ96KB5 322 aa4.1□□□□□ -1.75
RNF38-203ENST00000353739 CCDC43Q96MW1 224 aaKnown RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 BCCIPQ9P287 314 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNF38-203ENST00000353739 ARMCX3Q9UH62 379 aaPredicted RBP4.1□□□□□ -1.75
RNF38-203ENST00000353739 A0A0A6YYK5 440 aaPredicted RBP4.09□□□□□ -1.75
RNF38-203ENST00000353739 SPDYE2BA6NHP3 402 aa4.09□□□□□ -1.75
RNF38-203ENST00000353739 PPP1R11O60927 126 aaPredicted RBP4.09□□□□□ -1.75
RNF38-203ENST00000353739 VIL1P09327 827 aaKnown RBP4.09□□□□□ -1.75
RNF38-203ENST00000353739 SPDYE6P0CI01 402 aa4.09□□□□□ -1.75
RNF38-203ENST00000353739 BCRP11274 1271 aa4.09□□□□□ -1.75
RNF38-203ENST00000353739 KRT13P13646 458 aa4.09□□□□□ -1.75
RNF38-203ENST00000353739 CYP11B2P19099 503 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms