RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 MICALL2Q8IY33 904 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 SAMD3Q8N6K7 520 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 SCFD1Q8WVM8 642 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 WDR11Q9BZH6 1224 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 EDEM3Q9BZQ6 932 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 KCTD10Q9H3F6 313 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 ZHX3Q9H4I2 956 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 AGPAT5Q9NUQ2 364 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 PNMA2Q9UL42 364 aa18.49■□□□□ 0.55
SAMM50-201ENST00000350028 MARSP56192 900 aaKnown RBP18.48■□□□□ 0.55
SAMM50-201ENST00000350028 GHRHRQ02643 423 aa18.48■□□□□ 0.55
SAMM50-201ENST00000350028 TUBB2AQ13885 445 aa18.48■□□□□ 0.55
SAMM50-201ENST00000350028 CCDC40Q4G0X9 1142 aa18.48■□□□□ 0.55
SAMM50-201ENST00000350028 KRT26Q7Z3Y9 468 aa18.48■□□□□ 0.55
SAMM50-201ENST00000350028 CCDC170Q8IYT3 715 aa18.48■□□□□ 0.55
SAMM50-201ENST00000350028 MNS1Q8NEH6 495 aa18.48■□□□□ 0.55
SAMM50-201ENST00000350028 AGBL1Q96MI9 1066 aa18.48■□□□□ 0.55
SAMM50-201ENST00000350028 TUBB2BQ9BVA1 445 aa18.48■□□□□ 0.55
SAMM50-201ENST00000350028 FGFBP2Q9BYJ0 223 aa18.48■□□□□ 0.55
SAMM50-201ENST00000350028 CNOT7Q9UIV1 285 aaKnown RBP18.48■□□□□ 0.55
SAMM50-201ENST00000350028 ZNF536O15090 1300 aa18.48■□□□□ 0.55
SAMM50-201ENST00000350028 FZD9O00144 591 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 GAS7O60861 476 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 EGFRP00533 1210 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 KRT83P78385 493 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 CYP4A11Q02928 519 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 RAD51AP2Q09MP3 1159 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 ARHGAP27Q6ZUM4 889 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 NELFCDQ8IXH7 590 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 REEP2Q9BRK0 252 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 MXRA8Q9BRK3 442 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 BHMT2Q9H2M3 363 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 MAP3K20Q9NYL2 800 aaKnown RBP18.47■□□□□ 0.55
SAMM50-201ENST00000350028 RGL1Q9NZL6 768 aa18.47■□□□□ 0.55
SAMM50-201ENST00000350028 RPTORQ8N122 1335 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 NKRFO15226 690 aaKnown RBP eCLIP18.46■□□□□ 0.55
SAMM50-201ENST00000350028 SLITRK3O94933 977 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 GAP43P17677 238 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 HNRNPH3P31942 346 aaKnown RBP18.46■□□□□ 0.55
SAMM50-201ENST00000350028 ARHGAP25P42331 645 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 EPHA7Q15375 998 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 ZNF569Q5MCW4 686 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 DCAF15Q66K64 600 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 ZNF662Q6ZS27 426 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 EPM2AIP1Q7L775 607 aaPredicted RBP18.46■□□□□ 0.55
SAMM50-201ENST00000350028 NIPA1Q7RTP0 329 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 HOOK2Q96ED9 719 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 DYDC2Q96IM9 177 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 ZNF577Q9BSK1 485 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 TEKT3Q9BXF9 490 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 HAUS4Q9H6D7 363 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 HACL1Q9UJ83 578 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 MRFAP1Q9Y605 127 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 A0A0U1RQJ8 604 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 CETN3O15182 167 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 TBCAO75347 108 aaKnown RBP18.46■□□□□ 0.55
SAMM50-201ENST00000350028 FDX1P10109 184 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 BCRP11274 1271 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 USP14P54578 494 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 UBXN2AP68543 259 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 SAMD7Q7Z3H4 446 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 SFR1Q86XK3 245 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 ATRIPQ8WXE1 791 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 CLEC4DQ8WXI8 215 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 RIT2Q99578 217 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 CARD6Q9BX69 1037 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 IRX2Q9BZI1 471 aaPredicted RBP18.46■□□□□ 0.55
SAMM50-201ENST00000350028 MMRN2Q9H8L6 949 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.46■□□□□ 0.55
SAMM50-201ENST00000350028 FAM184BQ9ULE4 1060 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 SCAF8Q9UPN6 1271 aaKnown RBP18.46■□□□□ 0.55
SAMM50-201ENST00000350028 TRAF3IP3Q9Y228 551 aa18.46■□□□□ 0.55
SAMM50-201ENST00000350028 V9GYY5 206 aaPredicted RBP18.46■□□□□ 0.55
SAMM50-201ENST00000350028 EFCAB8A8MWE9 144 aa18.45■□□□□ 0.54
SAMM50-201ENST00000350028 EIF3CLB5ME19 914 aaKnown RBP18.45■□□□□ 0.54
SAMM50-201ENST00000350028 ARP10275 920 aa18.45■□□□□ 0.54
SAMM50-201ENST00000350028 YBX3P16989 372 aaKnown RBP eCLIP18.45■□□□□ 0.547e-7■□□□□ 11
SAMM50-201ENST00000350028 RASSF7Q02833 373 aa18.45■□□□□ 0.54
SAMM50-201ENST00000350028 ADAM9Q13443 819 aa18.45■□□□□ 0.54
SAMM50-201ENST00000350028 CTTNQ14247 550 aaKnown RBP18.45■□□□□ 0.54
SAMM50-201ENST00000350028 ELF2Q15723 593 aa18.45■□□□□ 0.54
SAMM50-201ENST00000350028 TBC1D10BQ4KMP7 808 aaPredicted RBP18.45■□□□□ 0.54
SAMM50-201ENST00000350028 RINT1Q6NUQ1 792 aa18.45■□□□□ 0.54
SAMM50-201ENST00000350028 TPH2Q8IWU9 490 aa18.45■□□□□ 0.54
SAMM50-201ENST00000350028 NACC1Q96RE7 527 aa18.45■□□□□ 0.54
SAMM50-201ENST00000350028 EIF3CQ99613 913 aaKnown RBP18.45■□□□□ 0.54
SAMM50-201ENST00000350028 TANGO6Q9C0B7 1094 aa18.45■□□□□ 0.54
SAMM50-201ENST00000350028 SLC38A10Q9HBR0 1119 aa18.45■□□□□ 0.54
SAMM50-201ENST00000350028 REXO2Q9Y3B8 237 aaKnown RBP18.45■□□□□ 0.54
SAMM50-201ENST00000350028 GJA3Q9Y6H8 435 aa18.45■□□□□ 0.54
SAMM50-201ENST00000350028 CALUO43852 315 aaPredicted RBP18.44■□□□□ 0.54
SAMM50-201ENST00000350028 KNOP1Q1ED39 458 aaKnown RBP18.44■□□□□ 0.54
SAMM50-201ENST00000350028 BMT2Q1RMZ1 405 aa18.44■□□□□ 0.54
SAMM50-201ENST00000350028 B3GNT9Q6UX72 402 aa18.44■□□□□ 0.54
SAMM50-201ENST00000350028 TRIM59Q8IWR1 403 aa18.44■□□□□ 0.54
SAMM50-201ENST00000350028 NEK11Q8NG66 645 aa18.44■□□□□ 0.54
SAMM50-201ENST00000350028 NEK9Q8TD19 979 aa18.44■□□□□ 0.54
SAMM50-201ENST00000350028 UBXN4Q92575 508 aa18.44■□□□□ 0.54
SAMM50-201ENST00000350028 RUSC1Q9BVN2 902 aa18.44■□□□□ 0.54
SAMM50-201ENST00000350028 NHEJ1Q9H9Q4 299 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms